RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 ANGPTL7O43827 346 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 C1QL1O75973 258 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 CLDN1O95832 211 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 PDGFBP01127 241 aaPredicted RBP12.72□□□□□ -0.37
RTF1-201ENST00000389629 AADACP22760 399 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 RPL29P47914 159 aaKnown RBP12.72□□□□□ -0.37
RTF1-201ENST00000389629 MOGAT2Q3SYC2 334 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 PRAMEF20Q5VT98 475 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 ZNF600Q6ZNG1 722 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 VSTM2LQ96N03 204 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 PQLC2LA1A4F0 135 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 SOCS1O15524 211 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 CDAP32320 146 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
RTF1-201ENST00000389629 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
RTF1-201ENST00000389629 MRPS18BQ9Y676 258 aaKnown RBP12.72□□□□□ -0.37
RTF1-201ENST00000389629 ACTL6AO96019 429 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 SRPXP78539 464 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 OBP2AQ9NY56 170 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 LIPGQ9Y5X9 500 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 MMP7P09237 267 aaPredicted RBP12.71□□□□□ -0.37
RTF1-201ENST00000389629 ZNF121P58317 390 aaPredicted RBP12.71□□□□□ -0.37
RTF1-201ENST00000389629 TSPO2Q5TGU0 170 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 ETV3LQ6ZN32 361 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 ASB5Q8WWX0 329 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 TXN2Q99757 166 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 AICDAQ9GZX7 198 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 A0A1W2PNR3 127 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 OR3A4PP47883 348 aa12.71□□□□□ -0.37
RTF1-201ENST00000389629 ZNF133P52736 654 aaPredicted RBP12.71□□□□□ -0.37
RTF1-201ENST00000389629 RCC2Q9P258 522 aaKnown RBP12.71□□□□□ -0.37
RTF1-201ENST00000389629 FAM24AA6NFZ4 105 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 C9J4A7 227 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 FAHP16930 419 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 PSMB3P49720 205 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 GFERP55789 205 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 HBG1P69891 147 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 HBG2P69892 147 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 PDCD1Q15116 288 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 MICBQ29980 383 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 UNQ9370/PRO34162Q6UXP9 181 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 C11orf40Q8WZ69 217 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 LHX4Q969G2 390 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 MRGPRX1Q96LB2 322 aa12.71□□□□□ -0.38
RTF1-201ENST00000389629 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.38
RTF1-201ENST00000389629 KLK3P07288 261 aaPredicted RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 MDKP21741 143 aaPredicted RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 HTR5AP47898 357 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 TAS2R30P59541 319 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 PLP2Q04941 152 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 C9orf135Q5VTT2 229 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 KIAA0895LQ68EN5 471 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 ATG4DQ86TL0 474 aaPredicted RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 C20orf196Q8IYI0 205 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 TNS1Q9HBL0 1735 aaKnown RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 A0A1B0GV90 55 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 KIR3DL2P43630 455 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 LPAR6P43657 344 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 FAHD2BQ6P2I3 314 aaPredicted RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 BRICD5Q6PL45 260 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 SLC36A1Q7Z2H8 476 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 HIST1H2BAQ96A08 127 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 FAHD2AQ96GK7 314 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 THOC3Q96J01 351 aaKnown RBP12.7□□□□□ -0.38
RTF1-201ENST00000389629 BCO1Q9HAY6 547 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 ZNF816-ZNF321PA0A0X1KG74 233 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 CD1AP06126 327 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 ZNF321PQ8N8H1 164 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 AMELYQ99218 206 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 REG4Q9BYZ8 158 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 VN1R1Q9GZP7 353 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 CD207Q9UJ71 328 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 CA14Q9ULX7 337 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 OSGIN2Q9Y236 505 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 FIGNL2A6NMB9 653 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 LIMK1P53667 647 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 C6orf201Q7Z4U5 140 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 POMT1Q9Y6A1 747 aa12.7□□□□□ -0.38
RTF1-201ENST00000389629 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
RTF1-201ENST00000389629 BAXQ07812 192 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 DHRS11Q6UWP2 260 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 LRP11Q86VZ4 500 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 MR1Q95460 341 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 ENY2Q9NPA8 101 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 G3V3Y1 287 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 CLDN34H7C241 214 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 NCR3LG1Q68D85 454 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 OR13D1Q8NGV5 346 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 RARRES3Q9UL19 164 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 UPK3AO75631 287 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 RBP2P50120 134 aa12.69□□□□□ -0.38
RTF1-201ENST00000389629 MRPL21Q7Z2W9 205 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms