RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SULT1A3P0DMM9 295 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 SULT1A4P0DMN0 295 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 TBPP20226 339 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 CPT2P23786 658 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 APLNRP35414 380 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 EIF2S3P41091 472 aaKnown RBP21.82■■□□□ 1.08
SHOX2-201ENST00000389589 RAD52P43351 418 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 ATP1B3P54709 279 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 TMEM50BP56557 158 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 MRPS15P82914 257 aaKnown RBP21.82■■□□□ 1.08
SHOX2-201ENST00000389589 TGFBR3Q03167 851 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 TAAR6Q96RI8 345 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 PAIP2BQ9ULR5 123 aaKnown RBP21.82■■□□□ 1.08
SHOX2-201ENST00000389589 SNRPGP15A8MWD9 76 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 DISC1C4P0D8 188 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 CNOT4O95628 575 aaKnown RBP21.81■■□□□ 1.08
SHOX2-201ENST00000389589 AMY2AP04746 511 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 ERP29P30040 261 aaKnown RBP21.81■■□□□ 1.08
SHOX2-201ENST00000389589 PIAS4Q8N2W9 510 aaPredicted RBP21.81■■□□□ 1.08
SHOX2-201ENST00000389589 TINAGL1Q9GZM7 467 aaPredicted RBP21.81■■□□□ 1.08
SHOX2-201ENST00000389589 OR14I1A6ND48 311 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 AHRRA9YTQ3 701 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 M0QYG6 137 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 MFNGO00587 321 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 SSX5O60225 188 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 ANXA3P12429 323 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 ANXA7P20073 488 aaKnown RBP21.81■■□□□ 1.08
SHOX2-201ENST00000389589 PRSS12P56730 875 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 ASCL4Q6XD76 172 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 Q6ZS92 163 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 MOB3CQ70IA8 216 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 CCDC36Q8IYA8 594 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 PIGCQ92535 297 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 ZNF222Q9UK12 451 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 PLEKHA6Q9Y2H5 1048 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 KCNK7Q9Y2U2 307 aa21.81■■□□□ 1.08
SHOX2-201ENST00000389589 CELSR3Q9NYQ7 3312 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 FOXI3A8MTJ6 420 aaPredicted RBP21.8■■□□□ 1.08
SHOX2-201ENST00000389589 ZNF780AO75290 641 aaPredicted RBP21.8■■□□□ 1.08
SHOX2-201ENST00000389589 WISP2O76076 250 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 CCL2P13500 99 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 CBX5P45973 191 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 GK2Q14410 553 aaPredicted RBP21.8■■□□□ 1.08
SHOX2-201ENST00000389589 ZMYND11Q15326 602 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 RNASE10Q5GAN6 216 aaKnown RBP21.8■■□□□ 1.08
SHOX2-201ENST00000389589 PLCXD3Q63HM9 321 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 OR2A2Q6IF42 318 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 MRPL21Q7Z2W9 205 aaKnown RBP21.8■■□□□ 1.08
SHOX2-201ENST00000389589 BPIFB2Q8N4F0 458 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 OR5M9Q8NGP3 310 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 OR10K1Q8NGX5 313 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 ARHGAP5-AS1Q96IT6 56 aa21.8■■□□□ 1.08
SHOX2-201ENST00000389589 IGKV1-27A0A075B6S5 117 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 CREBL2O60519 120 aaPredicted RBP21.79■■□□□ 1.08
SHOX2-201ENST00000389589 ZNF735P0CB33 412 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 MPZP25189 248 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 GZMKP49863 264 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 RSU1Q15404 277 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 IDO2Q6ZQW0 420 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 PRRT1Q99946 306 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 SLC2A8Q9NY64 477 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 ANAPC10Q9UM13 185 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 RLN1P04808 185 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 SLC36A1Q7Z2H8 476 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 GCNT2Q8N0V5 402 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 GVQW1Q8N7I0 195 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 OR4S1Q8NGB4 309 aa21.79■■□□□ 1.08
SHOX2-201ENST00000389589 CSTBP04080 98 aaKnown RBP21.78■■□□□ 1.08
SHOX2-201ENST00000389589 BLVRBP30043 206 aaPredicted RBP21.78■■□□□ 1.08
SHOX2-201ENST00000389589 ZNF626Q68DY1 528 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 RTL6Q6ICC9 239 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 Q6ZT83 130 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 CSNK2A3Q8NEV1 391 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 SEC22CQ9BRL7 303 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 CACNA1GO43497 2377 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 MEIKINA0A087WXM9 373 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 NAT1P18440 290 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 ACSF3Q4G176 576 aaPredicted RBP21.78■■□□□ 1.08
SHOX2-201ENST00000389589 MDP1Q86V88 176 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 PXT1Q8NFP0 134 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 OR56B2PQ8NGI1 322 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 OR6K3Q8NGY3 331 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 Q96M66 194 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 OCSTAMPQ9BR26 566 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 ALX4Q9H161 411 aaPredicted RBP21.78■■□□□ 1.08
SHOX2-201ENST00000389589 PCDHB16Q9NRJ7 776 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 STARD10Q9Y365 291 aa21.78■■□□□ 1.08
SHOX2-201ENST00000389589 PTPRZ1P23471 2315 aaPredicted RBP21.77■■□□□ 1.08
SHOX2-201ENST00000389589 SERPINE3A8MV23 424 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 CA11O75493 328 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 CXCL3P19876 107 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 IGHV1-2P23083 117 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 PPA1Q15181 289 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 SF3B4Q15427 424 aaKnown RBP eCLIP21.77■■□□□ 1.08
SHOX2-201ENST00000389589 FTMTQ8N4E7 242 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 C9orf106Q8NAJ2 232 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 CAPSLQ8WWF8 208 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 SLC6A7Q99884 636 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 IL36GQ9NZH8 169 aa21.77■■□□□ 1.08
SHOX2-201ENST00000389589 HTR3BO95264 441 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms