RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ANAPC10Q9UM13 185 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 H0YL77 283 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 FGF17O60258 216 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 KLF8O95600 359 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 SERPINA2P20848 420 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 APOBEC1P41238 236 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 AFF3P51826 1226 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 HAGHQ16775 308 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 LIPHQ8WWY8 451 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 FOXN4Q96NZ1 517 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 SERINC2Q96SA4 455 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 APOOQ9BUR5 198 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 TBC1D29Q9UFV1 150 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 CD207Q9UJ71 328 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 HHLA2Q9UM44 414 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 BORCS7-ASMTA0A0B4J1R7 106 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 OR5H8P0DN80 308 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 HOXB2P14652 356 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 P2RY1P47900 373 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 NKAIN3Q8N8D7 197 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 OR13G1Q8NGZ3 307 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 HOXB13Q92826 284 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 SLC25A36Q96CQ1 311 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 RAB11FIP5Q9BXF6 653 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 TUBD1Q9UJT1 453 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 PITPNC1Q9UKF7 332 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 PRSS47A8MTI9 375 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 KLK2P20151 261 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 CMPK1P30085 196 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 CCL20P78556 96 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 RPL18Q07020 188 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 SQSTM1Q13501 440 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 HNF4GQ14541 408 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 ZNHIT3Q15649 155 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 C4orf17Q53FE4 359 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 AADACL3Q5VUY0 350 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 LHFPL1Q86WI0 220 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 SFTPA2Q8IWL1 248 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 TCFL5Q9UL49 500 aa12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 LSM5Q9Y4Y9 91 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-201ENST00000389386 A0A1W2PQF6 199 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 ASAH2BP0C7U1 165 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 PSG6Q00889 435 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 ENPP2Q13822 863 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 ZNF141Q15928 474 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 TMEM52Q8NDY8 209 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 METTL21AQ8WXB1 218 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 C8orf44Q96CB5 159 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 FAM210BQ96KR6 192 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 C5orf34Q96MH7 638 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 MMP25Q9NPA2 562 aa12.96□□□□□ -0.33
VPS9D1-201ENST00000389386 B3GALT2O43825 422 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 CTSVO60911 334 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 BPNT1O95861 308 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 SRP19P09132 144 aaKnown RBP12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 PGA4P0DJD7 388 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 PGA5P0DJD9 388 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 NTSR1P30989 418 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 ZNF429Q86V71 674 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEFF1Q8IYR6 380 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 NT5CQ8TCD5 201 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 CTHRC1Q96CG8 243 aa12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 NUDT16L1Q9BRJ7 211 aaKnown RBP12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.34
VPS9D1-201ENST00000389386 LOC107986453A0A1B0GWG9 222 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 ZNF860A6NHJ4 632 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 K7N7A8 449 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 SOX15O60248 233 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 SCGNO76038 276 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 GPR75O95800 540 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 AMBPP02760 352 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 C1QL3Q5VWW1 255 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 RHBDD1Q8TEB9 315 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 OR1E3Q8WZA6 343 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 SNX22Q96L94 193 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 OSGIN2Q9Y236 505 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 SLC17A4Q9Y2C5 497 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 GOLT1BQ9Y3E0 138 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 ARID1BQ8NFD5 2236 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 CSTAP01040 98 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 GABREP78334 506 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 BTG2P78543 158 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 LCN10Q6JVE6 187 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 HSD17B11Q8NBQ5 300 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms