RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PSMB5P28074 263 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 HTR2CP28335 458 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 PPP1CAP62136 330 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 RPL31P62899 125 aaKnown RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 ADIGQ0VDE8 80 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 LAMTOR4Q0VGL1 99 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 C16orf87Q6PH81 154 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 PID1Q7Z2X4 250 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 CYB561A3Q8NBI2 242 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 OR6N2Q8NGY6 317 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 NDNFQ8TB73 568 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 LRRC20Q8TCA0 184 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 C17orf50Q8WW18 174 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 MRPL48Q96GC5 212 aaKnown RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 GLT1D1Q96MS3 346 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 GABRG3Q99928 467 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 CHID1Q9BWS9 393 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 ZNF717Q9BY31 904 aaPredicted RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 STMN4Q9H169 189 aaPredicted RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 FARSAQ9Y285 508 aaKnown RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 C2orf16Q68DN1 1984 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 TUBGCP6Q96RT7 1819 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 IGLV2-18A0A075B6J9 118 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 IGHV1-3A0A0C4DH29 117 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 ISPDA4D126 451 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 GMDSO60547 372 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 ALOX12BO75342 701 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 OR5AL1P0C617 328 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 CD9P21926 228 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 ETV1P50549 477 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 IFFO1Q0D2I5 559 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 MAPRE2Q15555 327 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 VAMP3Q15836 100 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 PRSS8Q16651 343 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 NDUFAF6Q330K2 333 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 AADACL4Q5VUY2 407 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 UNQ9165/PRO28630Q6UXU0 137 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 LRRC52Q8N7C0 313 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 ZNF615Q8N8J6 731 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 ZNF709Q8N972 641 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 MSANTD3Q96H12 275 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 UTP23Q9BRU9 249 aaKnown RBP3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 MAP1LC3CQ9BXW4 147 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 WDR55Q9H6Y2 383 aaPredicted RBP3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 JCADQ9P266 1359 aa3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 AHDC1Q5TGY3 1603 aaPredicted RBP3.19□□□□□ -1.9
RNU6-40P-201ENST00000384254 COLCA2A8K830 154 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 PSMD11O00231 422 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 POLR1CO15160 346 aaPredicted RBP3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 GNRHRP30968 328 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 PMELP40967 661 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 MLF1P58340 268 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 TRDNQ13061 729 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 TAL2Q16559 108 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 CDNFQ49AH0 187 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 FAM27D1Q5T7N8 215 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 HHATQ5VTY9 493 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 HMGN2P46Q86SG4 172 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 OR2Z1Q8NG97 314 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 SMARCD1Q96GM5 515 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 TBL1XR1Q9BZK7 514 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 VAX2Q9UIW0 290 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 SLC7A11Q9UPY5 501 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
RNU6-40P-201ENST00000384254 TRAV8-7A0A075B6U6 113 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 FAM240AA0A1B0GVK7 77 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 ANKRD20A5PA0PJZ0 165 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 RAB19A4D1S5 217 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 BTNL10A8MVZ5 291 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 CCDC22O60826 627 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 MAS1P04201 325 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 IVLP07476 585 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 TAS2R43P59537 309 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 KHDRBS2Q5VWX1 349 aaKnown RBP3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 RNF182Q8N6D2 247 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 OR5M1Q8NGP8 315 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 OR6K2Q8NGY2 324 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 CPNE4Q96A23 557 aaPredicted RBP3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 MARVELD1Q9BSK0 173 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 COA1Q9GZY4 146 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 CSNK1G1Q9HCP0 422 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 AP3M1Q9Y2T2 418 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 PPIL1Q9Y3C6 166 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 S4R3C0 116 aa3.17□□□□□ -1.9
RNU6-40P-201ENST00000384254 SCN1AP35498 2009 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 ZNF608Q9ULD9 1512 aaPredicted RBP3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 BOLA2-SMG1P6H3BVE0 249 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 J3QT63 122 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 TCAPO15273 167 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 APOA1P02647 267 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 BGNP21810 368 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 GALR1P47211 349 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 RGS6P49758 472 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 BTN1A1Q13410 526 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 MOBPQ13875 183 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 KLHL12Q53G59 568 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 FAM222AQ5U5X8 452 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 KDM4DQ6B0I6 523 aa3.16□□□□□ -1.9
RNU6-40P-201ENST00000384254 SLC25A34Q6PIV7 304 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms