RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 WDR13Q9H1Z4 485 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 SLC25A10Q9UBX3 287 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-204ENST00000380749 VPREB3Q9UKI3 123 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 KLHDC2Q9Y2U9 406 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 LRP12Q9Y561 859 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 ZNF816-ZNF321PA0A0X1KG74 233 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 A0A1W2PQ09 198 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 AQP12BA6NM10 295 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 NPFFO15130 113 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 AKR7A2O43488 359 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 AMY2BP19961 511 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 GLRA1P23415 457 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 PDLIM3Q53GG5 364 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-204ENST00000380749 NCR3LG1Q68D85 454 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 ZNF788Q6ZQV5 615 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 COMMD2Q86X83 199 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 CPOQ8IVL8 374 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 AQP12AQ8IXF9 295 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 LINC01006Q8NI28 216 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 UBE2FQ969M7 185 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 CLPTM1LQ96KA5 538 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 LYZL4Q96KX0 146 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 C1orf21Q9H246 121 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 SEMA6AQ9H2E6 1030 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 MMP27Q9H306 513 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 NLKQ9UBE8 527 aa14.16□□□□□ -0.14
HMGN1-204ENST00000380749 RNASEK-C17orf49H0YIS7 233 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 M0R1W7 72 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 SIGLEC5O15389 551 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 NDUFB7P17568 137 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 MAP2K3P46734 347 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 GPM6AP51674 278 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 CAV3P56539 151 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 GNG3P63215 75 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 BLMHQ13867 455 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 FAM76BQ5HYJ3 339 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 KCTD18Q6PI47 426 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-204ENST00000380749 TMEM179BQ7Z7N9 219 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 ANGPTL6Q8NI99 470 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 CANT1Q8WVQ1 401 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 ITFG2Q969R8 447 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 THTPAQ9BU02 230 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 METTL8Q9H825 291 aaKnown RBP14.15□□□□□ -0.14
HMGN1-204ENST00000380749 YY1AP1Q9H869 796 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 TAS2R1Q9NYW7 299 aa14.15□□□□□ -0.14
HMGN1-204ENST00000380749 A0A0U1RQV5 110 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 OR2AT4A6NND4 320 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 CLPXO76031 633 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 FAM107AO95990 144 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 ANXA8P13928 327 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 ALOX5APP20292 161 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 SLC2A5P22732 501 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 DCTDP32321 178 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 GABRA2P47869 451 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 PROK1P58294 105 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 CDK5Q00535 292 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 KLRD1Q13241 179 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 TAF9Q16594 264 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 DGUOKQ16854 277 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 Q8N7P7 452 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 ZSCAN4Q8NAM6 433 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-204ENST00000380749 BBS1Q8NFJ9 593 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 OR5R1Q8NH85 324 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 MROQ9BYG7 248 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 YIPF3Q9GZM5 350 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 FGF23Q9GZV9 251 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-204ENST00000380749 SLC25A19Q9HC21 320 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
HMGN1-204ENST00000380749 TRBV23-1A0A0A0MS06 115 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 A0A1W2PRD5 423 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 A0A1W2PRF3 423 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 A0A1W2PRM7 423 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 MEIOCA2RUB1 952 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 ACOD1A6NK06 481 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 OR5B21A6NL26 309 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 ACAA1P09110 424 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-204ENST00000380749 T-ENOLP0DO92 83 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 ATP6V1B1P15313 513 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 SAA4P35542 130 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 PRB3Q04118 309 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-204ENST00000380749 APOFQ13790 326 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 ZNF829Q3KNS6 432 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-204ENST00000380749 CEP78Q5JTW2 689 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 DEGS2Q6QHC5 323 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 C1orf122Q6ZSJ8 110 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 Q6ZSV7 163 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 THAP5Q7Z6K1 395 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 HS3ST5Q8IZT8 346 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 TMEM185AQ8NFB2 350 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 DNAJC9Q8WXX5 260 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 TCF7L1Q9HCS4 588 aa14.13□□□□□ -0.15
HMGN1-204ENST00000380749 TMEM269A0A1B0GVZ9 245 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 ZNF732B4DXR9 585 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 UBE2E1P51965 193 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 ACSM1Q08AH1 577 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 FLOT2Q14254 428 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 CEACAM21Q3KPI0 293 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 SPATA24Q86W54 205 aa14.12□□□□□ -0.15
HMGN1-204ENST00000380749 ZNF671Q8TAW3 534 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms