RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SLC30A7Q8NEW0 376 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 SEMA6DQ8NFY4 1073 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 OR5AP2Q8NGF4 316 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 CTHRC1Q96CG8 243 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 ZNF286AQ9HBT8 521 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 HEXAP06865 529 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 HTR5AP47898 357 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 MFAP5Q13361 173 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 TAF9Q16594 264 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 ISXQ2M1V0 245 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 SOHLH1Q5JUK2 328 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 SLC25A28Q96A46 364 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 GABRG3Q99928 467 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 TCEAL7Q9BRU2 100 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 JTBO76095 146 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 IKZF1Q13422 519 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 ZNF345Q14585 488 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 ZNF100Q8IYN0 542 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 NOXO1Q8NFA2 376 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 OR1L3Q8NH93 324 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 RPS4Y2Q8TD47 263 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 NMES1Q9C002 83 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 CACNA1GO43497 2377 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 FOLR1P15328 257 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 F2RL1P55085 397 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 GRB2P62993 217 aaKnown RBP10.11□□□□□ -0.79
SMAD9-202ENST00000379826 EIF3IQ13347 325 aaKnown RBP10.11□□□□□ -0.79
SMAD9-202ENST00000379826 KIAA0141Q14154 515 aaPredicted RBP10.11□□□□□ -0.79
SMAD9-202ENST00000379826 ARL6IP1Q15041 203 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 OR1N1Q8NGS0 311 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 MITD1Q8WV92 249 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 UTP23Q9BRU9 249 aaKnown RBP10.11□□□□□ -0.79
SMAD9-202ENST00000379826 RAB18Q9NP72 206 aa10.11□□□□□ -0.79
SMAD9-202ENST00000379826 COL4A4P53420 1690 aaPredicted RBP10.11□□□□□ -0.79
SMAD9-202ENST00000379826 SDK1Q7Z5N4 2213 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 ZNF98A6NK75 572 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 GPR85P60893 370 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 TFAP2EQ6VUC0 442 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 LILRB2Q8N423 598 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 OR2I1PQ8NGU4 316 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 IL1F10Q8WWZ1 152 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 VN1R1Q9GZP7 353 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 CLEC1BQ9P126 229 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 PCOLCE2Q9UKZ9 415 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 RCL1Q9Y2P8 373 aaKnown RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 DNASE2O00115 360 aaPredicted RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 F10P00742 488 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 FABP1P07148 127 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 HOXC4P09017 264 aaPredicted RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 GSTP1P09211 210 aaKnown RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 COX6B1P14854 86 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 FCARP24071 287 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 PCK2Q16822 640 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 C9orf40Q8IXQ3 194 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 CPNE4Q96A23 557 aaPredicted RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 SGCZQ96LD1 299 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 KCNK7Q9Y2U2 307 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 PLXNA2O75051 1894 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 OR2J2O76002 312 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 ZFAND5O76080 213 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 TBPP20226 339 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 EMG1Q92979 244 aaKnown RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 GPX7Q96SL4 187 aaPredicted RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 ANKUB1A6NFN9 424 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 HAX1O00165 279 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 SSSCA1O60232 199 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 EFNA3P52797 238 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 RPS4XP62701 263 aaKnown RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 SRSF3P84103 164 aaKnown RBP10.1□□□□□ -0.79
SMAD9-202ENST00000379826 SLC38A9Q8NBW4 561 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 OR8B12Q8NGG6 310 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 NELFAQ9H3P2 528 aa10.1□□□□□ -0.79
SMAD9-202ENST00000379826 A0A1W2PP11 408 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 PDGFBP01127 241 aaPredicted RBP10.09□□□□□ -0.79
SMAD9-202ENST00000379826 MUC1P15941 1255 aaPredicted RBP10.09□□□□□ -0.79
SMAD9-202ENST00000379826 ZBTB25P24278 435 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 DHODHQ02127 395 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 FAM24BQ8N5W8 94 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 FBXL17Q9UF56 701 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 BPTFQ12830 3046 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 ALG1L2C9J202 215 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 ONECUT2O95948 504 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 ARG1P05089 322 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 S100A12P80511 92 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 TSPO2Q5TGU0 170 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 RTL6Q6ICC9 239 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 TLNRD1Q9H1K6 362 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 C19orf12Q9NSK7 152 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 SCN8AQ9UQD0 1980 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 H7C1Q1 480 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 OR5H8P0DN80 308 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 RFC3P40938 356 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 ALDH3B1P43353 468 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 LINC00114Q6XXX2 140 aa10.09□□□□□ -0.79
SMAD9-202ENST00000379826 ALX4Q9H161 411 aaPredicted RBP10.09□□□□□ -0.79
SMAD9-202ENST00000379826 UNKLQ9H9P5 680 aaKnown RBP10.09□□□□□ -0.79
SMAD9-202ENST00000379826 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms