RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 SKA3Q8IX90 412 aa11.46□□□□□ -0.57
SH3KBP1-202ENST00000379698 CCDC54Q8NEL0 328 aa11.46□□□□□ -0.57
SH3KBP1-202ENST00000379698 OR5D18Q8NGL1 313 aa11.46□□□□□ -0.57
SH3KBP1-202ENST00000379698 ZNF160Q9HCG1 818 aa11.46□□□□□ -0.57
SH3KBP1-202ENST00000379698 V9GYS6 101 aa11.46□□□□□ -0.57
SH3KBP1-202ENST00000379698 PMS2P1A4D2B8 440 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 PCP4L1A6NKN8 68 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 DHRS3O75911 302 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 KNG1P01042 644 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 GAPDHP04406 335 aaKnown RBP11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 SRFP11831 508 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 PTGER4P35408 488 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 AKR1D1P51857 326 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 SLC35A1P78382 337 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 RBM39Q14498 530 aaKnown RBP11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 SMCO1Q147U7 214 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 CRIP3Q6Q6R5 217 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 CPEB2Q7Z5Q1 589 aaKnown RBP11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 SLC38A9Q8NBW4 561 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 GJC3Q8NFK1 279 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 C10orf35Q96D05 121 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 PARP11Q9NR21 331 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 FAM96BQ9Y3D0 163 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 SZT2Q5T011 3432 aa11.46□□□□□ -0.58
SH3KBP1-202ENST00000379698 OR2J2O76002 312 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 JTBO76095 146 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 FARS2O95363 451 aaKnown RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 MYF5P13349 255 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 ZNF708P17019 499 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 SERPINA2P20848 420 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 MSR1P21757 451 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 SFTPDP35247 375 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 LPAR6P43657 344 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 LBX1P52954 281 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 PDZK1IP1Q13113 114 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 AVPI1Q5T686 147 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 SGPP2Q8IWX5 399 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 SLC25A45Q8N413 288 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 FNDC9Q8TBE3 224 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 MAFIPQ8WZ33 124 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 HAS2Q92819 552 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 LIN37Q96GY3 246 aaPredicted RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 CYYR1Q96J86 154 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 LYZL4Q96KX0 146 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 CHST5Q9GZS9 411 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 PQLC2LA1A4F0 135 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 E9PLN8 166 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 K7EPK0 472 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 RAMP1O60894 148 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 MTRF1O75570 445 aaKnown RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 IFNA21P01568 189 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 CD5P06127 495 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 CTSDP07339 412 aaPredicted RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 RPL35P42766 123 aaKnown RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 ZNF133P52736 654 aaPredicted RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 F2RL1P55085 397 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 UBE2V2Q15819 145 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 TMEM176BQ3YBM2 270 aaPredicted RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 TMEM268Q5VZI3 342 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 BTNL8Q6UX41 500 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 Q6ZSR3 168 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 SULF2Q8IWU5 870 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 FAM71E2Q8N5Q1 922 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 NPRL2Q8WTW4 380 aa11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 ZNF701Q9NV72 531 aaPredicted RBP11.45□□□□□ -0.58
SH3KBP1-202ENST00000379698 FBXO24O75426 580 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 APOC1P02654 83 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 SERPINA5P05154 406 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 FCGR3AP08637 254 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 SFTA3P0C7M3 94 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 FCGR2AP12318 317 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 NME2P22392 152 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 CLDN17P56750 224 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 OPN5Q6U736 354 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 FADS6Q8N9I5 356 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 DMBX1Q8NFW5 382 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 SEMA6DQ8NFY4 1073 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 SHDQ96IW2 340 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 NELFAQ9H3P2 528 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 TUBD1Q9UJT1 453 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 EDARQ9UNE0 448 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 USP34Q70CQ2 3546 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 SPTBN5Q9NRC6 3674 aaKnown RBP11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 ADAMTS20P59510 1910 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 CSNK1A1P48729 337 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 FAM76BQ5HYJ3 339 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 C10orf128Q5T292 105 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 SPACA9Q96E40 222 aaPredicted RBP11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 ZNF2Q9BSG1 426 aaPredicted RBP11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 ELL3Q9HB65 397 aaPredicted RBP11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 C19orf25Q9UFG5 118 aaPredicted RBP11.44□□□□□ -0.58
SH3KBP1-202ENST00000379698 PCDHGA1Q9Y5H4 931 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms