RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 HHLA2Q9UM44 414 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF208O43345 1280 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ATG12O94817 140 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 UBE2NLQ5JXB2 153 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ZBTB37Q5TC79 503 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 RTN4RL2Q86UN3 420 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 SPAG16Q8N0X2 631 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 MIB2Q96AX9 1013 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 FAM3DQ96BQ1 224 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ULBP2Q9BZM5 246 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 TREM2Q9NZC2 230 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ABRACLQ9P1F3 81 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 A0A096LPE4 126 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 A0A1W2PPZ6 126 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 UBL3O95164 117 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ARSBP15848 533 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 HLA-DMAP28067 261 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 CD1BP29016 333 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 CD96P40200 585 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 SUCLG1P53597 346 aaKnown RBP9.53□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF121P58317 390 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-201ENST00000379433 NKPD1Q17RQ9 610 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-201ENST00000379433 NOXO1Q8NFA2 376 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 OR6F1Q8NGZ6 308 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
NEDD9-201ENST00000379433 DIRC2Q96SL1 478 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 LHFPL6Q9Y693 200 aa9.53□□□□□ -0.88
NEDD9-201ENST00000379433 OR14I1A6ND48 311 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 PGA4P0DJD7 388 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 PGA3P0DJD8 388 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 MNDAP41218 407 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 SUMO3P55854 103 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 SLC35A1P78382 337 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 TRIP6Q15654 476 aaKnown RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 RAB11BQ15907 218 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 C17orf107Q6ZR85 190 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 OR52N4Q8NGI2 321 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 OR10S1Q8NGN2 331 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 OR2AE1Q8NHA4 323 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 FCAMRQ8WWV6 532 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 ASB17Q8WXJ9 295 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 ADAT3Q96EY9 351 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 PRRG4Q9BZD6 226 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 PBOV1Q9GZY1 135 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 SLCO5A1Q9H2Y9 848 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF319Q9P2F9 582 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 LOC102723996A0A087X1L8 192 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 TGFAP01135 160 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 ACSM4P0C7M7 580 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 DSCR4P56555 118 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 NUTF2P61970 127 aaKnown RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 RBX1P62877 108 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 ASPHD2Q6ICH7 369 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 LRRTM1Q86UE6 522 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 GPR137CQ8N3F9 429 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 OR10A7Q8NGE5 316 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 OR10K1Q8NGX5 313 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 RCC1LQ96I51 464 aaKnown RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 OXGR1Q96P68 337 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 BANF2Q9H503 90 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 METTL8Q9H825 291 aaKnown RBP9.52□□□□□ -0.89
NEDD9-201ENST00000379433 GPR84Q9NQS5 396 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 KCNK7Q9Y2U2 307 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 R4GMQ9 66 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 RELNP78509 3460 aa9.52□□□□□ -0.89
NEDD9-201ENST00000379433 CCSO14618 274 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF780AO75290 641 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 RLN2P04090 185 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 TCRBP04435 133 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 CCL2P13500 99 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF20P17024 532 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 MAGEA5P43359 124 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 VEGFCP49767 419 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 CEBPGP53567 150 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 TAS2R20P59543 309 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 AP3S2P59780 193 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 SLC36A2Q495M3 483 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 SFRP5Q5T4F7 317 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 HACD4Q5VWC8 232 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 COMMD7Q86VX2 200 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 OR5T2Q8NGG2 359 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 PAQR8Q8TEZ7 354 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 SOSTQ9BQB4 213 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 DEFB127Q9H1M4 99 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 CALHM2Q9HA72 323 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 GLS2Q9UI32 602 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 CHD8Q9HCK8 2581 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 A0A1B0GW15 77 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 A0A1W2PP11 408 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 TMEM235A6NFC5 223 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 PHYHO14832 338 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ARPC1BO15143 372 aaKnown RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms