RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EIF1BO60739 113 aaKnown RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF324O75467 553 aaPredicted RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 ADAP1O75689 374 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GPANK1O95872 356 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 FAHP16930 419 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 RIPPLY3P57055 190 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GNB1P62873 340 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 TCF23Q7RTU1 214 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ANKRD37Q7Z713 158 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 OR10W1Q8NGF6 305 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 OR2V2Q96R30 315 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 CLEC2DQ9UHP7 191 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF860A6NHJ4 632 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF785A8K8V0 405 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 CD3DP04234 171 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 SOD3P08294 240 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ALG14Q96F25 216 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GSN-AS1Q9NRJ2 163 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 GPR34Q9UPC5 381 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF729A6NN14 1252 aaPredicted RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 RER1O15258 196 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 XRCC2O43543 280 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF519Q8TB69 540 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ACPTQ9BZG2 426 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 CALHM2Q9HA72 323 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 SEBOXQ9HB31 216 aaPredicted RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 PRF1P14222 555 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 FLT3LGP49771 235 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF418Q8TF45 676 aaPredicted RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 BCO2Q9BYV7 579 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 N4BP2Q86UW6 1770 aaPredicted RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 LEPROTL1O95214 131 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 PIGAP37287 484 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 DUSP3P51452 185 aaPredicted RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 SHC2P98077 582 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 SLC38A11Q08AI6 406 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ACSM6Q6P461 480 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 DNASE2BQ8WZ79 361 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 CHST8Q9H2A9 424 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 STARD10Q9Y365 291 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 MAP1BP46821 2468 aaKnown RBP7.92□□□□□ -1.14
LIG3-202ENST00000378526 TRBV11-1A0A0K0K1C0 115 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 A1L4Q6 167 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 MASP2O00187 686 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 SFTPCP11686 197 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ADCYAP1R1P41586 468 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZXDAP98168 799 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZXDBP98169 803 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF273Q14593 569 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 ZNF766Q5HY98 468 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 FCRL6Q6DN72 434 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 DNAJC4Q9NNZ3 241 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 BICRAQ9NZM4 1560 aa7.92□□□□□ -1.14
LIG3-202ENST00000378526 TRAV8-2A0A0B4J237 113 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 MYBPHLA2RUH7 354 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 FCMRO60667 390 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ATF1P18846 271 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 CD52P31358 61 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 TMPRSS3P57727 454 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 RPS24P62847 133 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 FAM189BP81408 668 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 TBC1D28Q2M2D7 210 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 CYB5R2Q6BCY4 276 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ZFYVE21Q9BQ24 234 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ARHGAP9Q9BRR9 750 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 MAGT1Q9H0U3 335 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 CBLN4Q9NTU7 201 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 USP22Q9UPT9 525 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 CXorf1O96002 111 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 MYOGP15173 224 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 IER3P46695 156 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 OR52N4Q8NGI2 321 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ZNF502Q8TBZ5 544 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 RSPO3Q9BXY4 272 aaPredicted RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 WNT16Q9UBV4 365 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 CBLCQ9ULV8 474 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ACP1P24666 158 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 SEC13P55735 322 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 ST3GAL2Q16842 350 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 SOWAHAQ2M3V2 549 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 HFEQ30201 348 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 SYS1Q8N2H4 156 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 OR10G4Q8NGN3 311 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 OR10G9Q8NGN4 311 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 OR10G7Q8NGN6 311 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 KCNE4Q8WWG9 221 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 DYNLRB1Q9NP97 96 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 PPRC1Q5VV67 1664 aaKnown RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 P2RY10O00398 339 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 POU3F2P20265 443 aaPredicted RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 SERF2P84101 59 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 LINC00116Q8NCU8 138 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 NEURL3Q96EH8 262 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 KTI12Q96EK9 354 aaPredicted RBP7.91□□□□□ -1.14
LIG3-202ENST00000378526 C16orf70Q9BSU1 422 aa7.91□□□□□ -1.14
LIG3-202ENST00000378526 MT-CO3P00414 261 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms