RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PRR13Q9NZ81 148 aa16.77■□□□□ 0.28
PCDHA4-201ENST00000378125 HPNP05981 417 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 AMY2BP19961 511 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 ATXN7L3Q14CW9 347 aaPredicted RBP16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 MPPED2Q15777 294 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 GPR87Q9BY21 358 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 PECRQ9BY49 303 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 TTTY12Q9BZ98 90 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 TIMM10BQ9Y5J6 103 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 ZNF407Q9C0G0 2248 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 FREM1Q5H8C1 2179 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 LOC400499M0QZD8 3231 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 IGKV1-27A0A075B6S5 117 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 POM121CA8CG34 1229 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 MRPL33O75394 65 aaKnown RBP16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 TUSC5Q8IXB3 177 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 OR5M8Q8NGP6 311 aa16.76■□□□□ 0.27
PCDHA4-201ENST00000378125 CCNOP22674 350 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 LHX2P50458 406 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 FOXG1P55316 489 aaPredicted RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 GMFBP60983 142 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 PLGLB1Q02325 96 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 ESCO2Q56NI9 601 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 CLVS2Q5SYC1 327 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 BATF2Q8N1L9 274 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 FAM89BQ8N5H3 189 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 ZDHHC22Q8N966 263 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 HDHD3Q9BSH5 251 aaPredicted RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 MFFQ9GZY8 342 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 MYOZ1Q9NP98 299 aaPredicted RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 ZNF701Q9NV72 531 aaPredicted RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 LINC00862A6NCI5 91 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 OR6C6A6NF89 314 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 OR5H14A6NHG9 310 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 HMSDA8MTL9 139 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 TERTO14746 1132 aaKnown RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 EFSO43281 561 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 CCL2P13500 99 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 SNU13P55769 128 aaKnown RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 RAB14P61106 215 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 ZNF92Q03936 586 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 RIPPLY1Q0D2K3 151 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 COMMD7Q86VX2 200 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 IL22RA1Q8N6P7 574 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 CSNK2A3Q8NEV1 391 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 OR5H2Q8NGV7 314 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 FNDC9Q8TBE3 224 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 SLC7A10Q9NS82 523 aa16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 MRPS18CQ9Y3D5 142 aaKnown RBP16.75■□□□□ 0.27
PCDHA4-201ENST00000378125 FRYQ5TBA9 3013 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 C21orf140B9A014 251 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 EEF1E1-BLOC1S5C9J1V9 151 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 C4BPBP20851 252 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 BEX5Q5H9J7 111 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 PABPC1L2AQ5JQF8 200 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 PDSS1Q5T2R2 415 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 HOGA1Q86XE5 327 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 CPEB3Q8NE35 698 aaKnown RBP16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 TERB2Q8NHR7 220 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 ADAMTS17Q8TE56 1095 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 B4GALT7Q9UBV7 327 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 DNAJC13O75165 2243 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 RFPL4AA6NLU0 287 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 RFPL4AL1F8VTS6 287 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 RP2O75695 350 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 MPZP25189 248 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 CLDN18P56856 261 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 SPEM2Q0P670 501 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 TGIF1Q15583 401 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 CLLU1Q5K131 121 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 BRICD5Q6PL45 260 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 ZNF546Q86UE3 836 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 TMEM251Q8N6I4 163 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 COQ8AQ8NI60 647 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 LOXL4Q96JB6 756 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 OCSTAMPQ9BR26 566 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 GSX2Q9BZM3 304 aa16.74■□□□□ 0.27
PCDHA4-201ENST00000378125 URB1O60287 2271 aaKnown RBP16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 C13orf42A0A1B0GVH6 325 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 FOXI3A8MTJ6 420 aaPredicted RBP16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 KCNAB3O43448 404 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 OR3A2P47893 321 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 TAF9Q16594 264 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 PNLIPRP3Q17RR3 467 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 PHB2Q99623 299 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 PRRG4Q9BZD6 226 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 PLEKHJ1Q9NW61 149 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 ABI3Q9P2A4 366 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 GHRLQ9UBU3 117 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 IGKV1D-8A0A087WSZ0 117 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 ZNF587BE7ETH6 402 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 TEX46H3BTG2 121 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 SPDEFO95238 335 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 ALDH3B1P43353 468 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 ATP1B3P54709 279 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 ARF1P84077 181 aaKnown RBP16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 PDCD1Q15116 288 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 ZMYND11Q15326 602 aa16.73■□□□□ 0.27
PCDHA4-201ENST00000378125 RSU1Q15404 277 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms