RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 FBLN5Q9UBX5 448 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 DMXL2Q8TDJ6 3036 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 MYO7BQ6PIF6 2116 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF816-ZNF321PA0A0X1KG74 233 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 NAP1L6A6NFF2 107 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 HMX3A6NHT5 357 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF850A8MQ14 1090 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 SOCS1O15524 211 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 RRP8O43159 456 aaKnown RBP11.18□□□□□ -0.62
TRIM40-206ENST00000376724 SPRY1O43609 319 aaPredicted RBP11.18□□□□□ -0.62
TRIM40-206ENST00000376724 ANGPTL7O43827 346 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 DHFRP00374 187 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 CD3DP04234 171 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 H2AFB2P0C5Z0 115 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 UBBP0CG47 229 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 TBR1Q16650 682 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 ZFP69Q49AA0 526 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 SLC30A7Q8NEW0 376 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 OR56B2PQ8NGI1 322 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 OR51T1Q8NGJ9 327 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 OR6K3Q8NGY3 331 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 AQP3Q92482 292 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 SPSB1Q96BD6 273 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 CST11Q9H112 138 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 OR10A4Q9H209 315 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 POFUT1Q9H488 388 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 KCNN3Q9UGI6 736 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
TRIM40-206ENST00000376724 A0A0A6YYJ9 748 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 K7ENP7 123 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 SERPINA5P05154 406 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 CELA3BP08861 270 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 NAT2P11245 290 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 WNT5AP41221 380 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 RBP2P50120 134 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 ACTBP60709 375 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 BTG1P62324 171 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 ACTG1P63261 375 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 OLFML2AQ68BL7 652 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 TMEM42Q69YG0 159 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 RPUSD3Q6P087 351 aaKnown RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 INO80CQ6PI98 192 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 FAM180AQ6UWF9 173 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF782Q6ZMW2 699 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 BTN2A1Q7KYR7 527 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 DPPA2Q7Z7J5 298 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 FJX1Q86VR8 437 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 SLC38A6Q8IZM9 456 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 OR4C16Q8NGL9 310 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 DACT3Q96B18 629 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 CYYR1Q96J86 154 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 URM1Q9BTM9 101 aaKnown RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 REPIN1Q9BWE0 567 aaKnown RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 PAPOLGQ9BWT3 736 aaKnown RBP11.17□□□□□ -0.62
TRIM40-206ENST00000376724 C1QTNF6Q9BXI9 259 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 GPR160Q9UJ42 338 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 ACACAQ13085 2346 aa11.17□□□□□ -0.62
TRIM40-206ENST00000376724 SULT1C2O00338 296 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 SCGNO76038 276 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 AKAIN1P0CW23 69 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 MGMTP16455 207 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 PSMB1P20618 241 aaKnown RBP11.16□□□□□ -0.62
TRIM40-206ENST00000376724 HLA-DMAP28067 261 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 FAUP35544 74 aaKnown RBP11.16□□□□□ -0.62
TRIM40-206ENST00000376724 IDH3GP51553 393 aaPredicted RBP11.16□□□□□ -0.62
TRIM40-206ENST00000376724 GABRA6Q16445 453 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 LINC00303Q3SY05 128 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 SEM1Q6ZVN7 128 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 TRAPPC6BQ86SZ2 158 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 CD163Q86VB7 1156 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 MYPOPQ86VE0 399 aaPredicted RBP11.16□□□□□ -0.62
TRIM40-206ENST00000376724 RPRMLQ8N4K4 120 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF610Q8N9Z0 462 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 BHLHE23Q8NDY6 225 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 OR56B4Q8NH76 319 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 RAB3CQ96E17 227 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
TRIM40-206ENST00000376724 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 GHRLQ9UBU3 117 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 SLC7A11Q9UPY5 501 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 DLL1O00548 723 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 TNFSF13O75888 250 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 CHRM2P08172 466 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 IL32P24001 234 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 ZP1P60852 638 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
TRIM40-206ENST00000376724 CD83Q01151 205 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 RSU1Q15404 277 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 TBC1D28Q2M2D7 210 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 PLAC9Q5JTB6 97 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 RTL6Q6ICC9 239 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 STEAP1BQ6NZ63 245 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 LHFPL2Q6ZUX7 228 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms