RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TSPAN13O95857 204 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CLDN10P78369 228 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 AQP6Q13520 282 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ADAMTSL4Q6UY14 1074 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ADAT3Q96EY9 351 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 GABARAPL3Q9BY60 117 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 DUSP21Q9H596 190 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 EMCNQ9ULC0 261 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 FAM26EQ8N5C1 309 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ZDHHC22Q8N966 263 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ST8SIA1Q92185 356 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 NAT8Q9UHE5 227 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 C19orf57Q0VDD7 668 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM267Q0VDI3 215 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CTRCQ99895 268 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM265A0A087WTH1 108 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 A0A1B0GV72 72 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 NUP37Q8NFH4 326 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ELOVL1Q9BW60 279 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ANGPTL4Q9BY76 406 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SLC17A5Q9NRA2 495 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TAAR3PQ9P1P4 343 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 GLI4P10075 376 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 BTF3P20290 206 aaKnown RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 PCSK6P29122 969 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 LINC00696Q6ZRV3 163 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SLC36A1Q7Z2H8 476 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SFTPA2Q8IWL1 248 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SFTPA1Q8IWL2 248 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 MAP6Q96JE9 813 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM167BQ9NRX6 74 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 FOXJ3Q9UPW0 622 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 MAP1LC3B2A6NCE7 125 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 M0R1B8 84 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 PDE6DO43924 150 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.72
VPS13A-205ENST00000376636 STARD4Q96DR4 205 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 MAP1LC3BQ9GZQ8 125 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 CSNK1G1Q9HCP0 422 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 SCN4AP35499 1836 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 PI4KAP42356 2102 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 GPANK1O95872 356 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 SPNS3Q6ZMD2 512 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 STAC2Q6ZMT1 411 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 PARS2Q7L3T8 475 aaKnown RBP10.52□□□□□ -0.72
VPS13A-205ENST00000376636 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.72
VPS13A-205ENST00000376636 CDRT15L2A8MXV6 281 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 SLC10A3P09131 477 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 DHRS7CA6NNS2 312 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 TDRD15B5MCY1 1934 aaKnown RBP10.52□□□□□ -0.73
VPS13A-205ENST00000376636 P01737 135 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 PRDX4Q13162 271 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 COX20Q5RI15 118 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 GLDNQ6ZMI3 551 aaPredicted RBP10.52□□□□□ -0.73
VPS13A-205ENST00000376636 MOB3BQ86TA1 216 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 USP3Q9Y6I4 520 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 FAM71E1Q6IPT2 247 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 CXorf36Q9H7Y0 433 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 FBXO4Q9UKT5 387 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 M0R082 166 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 OR2I1PQ8NGU4 316 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 NPTNQ9Y639 398 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 DOPEY2Q9Y3R5 2298 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 EMP1P54849 157 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 CLDN15P56746 228 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 LANCL1O43813 399 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 IVDP26440 423 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 CTSCP53634 463 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 PITX1P78337 314 aaPredicted RBP10.52□□□□□ -0.73
VPS13A-205ENST00000376636 SLC38A11Q08AI6 406 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 C12orf54Q6X4T0 127 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 D2HGDHQ8N465 521 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 Q96M85 177 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 PBOV1Q9GZY1 135 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 SMAD6O43541 496 aaKnown RBP10.52□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF26P17031 533 aaPredicted RBP10.52□□□□□ -0.73
VPS13A-205ENST00000376636 CCL11P51671 97 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 ARIH2OSQ8N7S6 290 aa10.52□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF260Q3ZCT1 412 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 ADPRHL1Q8NDY3 354 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 RGPD2P0DJD1 1756 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 PRSS37A4D1T9 235 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 GFRA2O00451 464 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 PTGFRP43088 359 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 SNX22Q96L94 193 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 EPXP11678 715 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 YRDCQ86U90 279 aaKnown RBP10.51□□□□□ -0.73
VPS13A-205ENST00000376636 FAM74A7A6NL05 159 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 MBPP02686 304 aaPredicted RBP10.51□□□□□ -0.73
VPS13A-205ENST00000376636 YBX1P67809 324 aaKnown RBP10.51□□□□□ -0.73
VPS13A-205ENST00000376636 RTP2Q5QGT7 225 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 GPA33Q99795 319 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 ALOX12BO75342 701 aa10.51□□□□□ -0.73
VPS13A-205ENST00000376636 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
VPS13A-205ENST00000376636 POMT2Q9UKY4 750 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms