RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 K7ESF4 209 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 TLX3O43711 291 aaPredicted RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 AMY2BP19961 511 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 SNU13P55769 128 aaKnown RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 CLDN17P56750 224 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 CCL7P80098 99 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 ARL6IP1Q15041 203 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 PNLDC1Q8NA58 520 aaKnown RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 OR4A4PQ8NGN8 299 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 DUSP23Q9BVJ7 150 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 WDR54Q9H977 334 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 PROK2Q9HC23 129 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 SH2D2AQ9NP31 389 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 MMP26Q9NRE1 261 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 ASF1BQ9NVP2 202 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 FOXD3Q9UJU5 478 aaPredicted RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 GLRA1P23415 457 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SFTPDP35247 375 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SLC9A3R2Q15599 337 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 NKAPLQ5M9Q1 402 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 IL34Q6ZMJ4 242 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 PUSL1Q8N0Z8 303 aaKnown RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 LIN37Q96GY3 246 aaPredicted RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SMIM8Q96KF7 97 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 KLF2Q9Y5W3 355 aaPredicted RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SIGLEC6O43699 453 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 EPHA8P29322 1005 aaPredicted RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 ECI1P42126 302 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 GFOD2Q3B7J2 385 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 PLEKHN1Q494U1 663 aaPredicted RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 CCDC157Q569K6 752 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SVBPQ8N300 66 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 ARL11Q969Q4 196 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 CLDN23Q96B33 292 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SAT2Q96F10 170 aaPredicted RBP9.35□□□□□ -0.91
ABCF1-202ENST00000376545 PGAM5Q96HS1 289 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 SHDQ96IW2 340 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 GPER1Q99527 375 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 ANGPTL4Q9BY76 406 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 DEFB126Q9BYW3 111 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF160Q9HCG1 818 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 PCDHB16Q9NRJ7 776 aa9.35□□□□□ -0.91
ABCF1-202ENST00000376545 WDFY3Q8IZQ1 3526 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 DHRS7CA6NNS2 312 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 TP53I11O14683 189 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 MSTNO14793 375 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 VAMP5O95183 116 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 AIMP2Q13155 320 aaKnown RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 TDHQ8IZJ6 230 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 CCDC74BQ96LY2 380 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 NECAB3Q96P71 396 aaPredicted RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 ACKR4Q9NPB9 350 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 LPAR3Q9UBY5 353 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 STMND1H3BQB6 276 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 TAAR5O14804 337 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 FGF5P12034 268 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 PI3P19957 117 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 BLVRBP30043 206 aaPredicted RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 CSNK1A1P48729 337 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 ARHGDIBP52566 201 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 CSNK2A1P68400 391 aaPredicted RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 RAB32Q13637 225 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 DHRS7BQ6IAN0 325 aaPredicted RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 SULF2Q8IWU5 870 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 ZIC4Q8N9L1 334 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 CSNK2A3Q8NEV1 391 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 PAQR8Q8TEZ7 354 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 IMMP1LQ96LU5 166 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 Q96M66 194 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 ST6GALNAC5Q9BVH7 336 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 SEC11CQ9BY50 192 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 AKIRIN1Q9H9L7 192 aaPredicted RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 PRR13Q9NZ81 148 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 WNT16Q9UBV4 365 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF629Q9UEG4 869 aaPredicted RBP9.34□□□□□ -0.91
ABCF1-202ENST00000376545 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
ABCF1-202ENST00000376545 OR5H15A6NDH6 313 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 GPR31O00270 319 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 EIF1BO60739 113 aaKnown RBP9.34□□□□□ -0.92
ABCF1-202ENST00000376545 PET100P0DJ07 73 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 PTGER4P35408 488 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 OR3A2P47893 321 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 RGS19P49795 217 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 FLI1Q01543 452 aaPredicted RBP9.34□□□□□ -0.92
ABCF1-202ENST00000376545 SPEM2Q0P670 501 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 GUCA2BQ16661 112 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 PPP1R3BQ86XI6 285 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 SAP25Q8TEE9 199 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 TMED6Q8WW62 240 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 INTS12Q96CB8 462 aaKnown RBP9.34□□□□□ -0.92
ABCF1-202ENST00000376545 EHFQ9NZC4 300 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 NDRG3Q9UGV2 375 aa9.34□□□□□ -0.92
ABCF1-202ENST00000376545 MCTS1Q9ULC4 181 aaKnown RBP9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms