RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 TMEM88Q6PEY1 159 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 TMEM200AQ86VY9 491 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 PPP1R3BQ86XI6 285 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 LDLRAD3Q86YD5 345 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 OR51F2Q8NH61 342 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 RHBDD1Q8TEB9 315 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
MSH5-201ENST00000375703 MMP26Q9NRE1 261 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 PIGLQ9Y2B2 252 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 V9GYS6 101 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 ADAMTS20P59510 1910 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 ADAMTS9Q9P2N4 1935 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 A0A0U1RQV5 110 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 SERPINE3A8MV23 424 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 SFTPBP07988 381 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 S100A10P60903 97 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 POC1AQ8NBT0 407 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 PP6455Q8WZ26 134 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 RBM24Q9BX46 236 aaKnown RBP12.76□□□□□ -0.37
MSH5-201ENST00000375703 ACKR4Q9NPB9 350 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 ZNF701Q9NV72 531 aaPredicted RBP12.76□□□□□ -0.37
MSH5-201ENST00000375703 HPF1Q9NWY4 346 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
MSH5-201ENST00000375703 ONECUT2O95948 504 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 PNLIPP16233 465 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 H3F3AP84243 136 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 IL15RAQ13261 267 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 ENDOGQ14249 297 aaKnown RBP12.76□□□□□ -0.37
MSH5-201ENST00000375703 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 HAGHLQ6PII5 290 aaPredicted RBP12.76□□□□□ -0.37
MSH5-201ENST00000375703 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 OR4A4PQ8NGN8 299 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 PIGTQ969N2 578 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 ADAT1Q9BUB4 502 aaKnown RBP12.76□□□□□ -0.37
MSH5-201ENST00000375703 SLC5A7Q9GZV3 580 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 TLNRD1Q9H1K6 362 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
MSH5-201ENST00000375703 IGHV3-15A0A0B4J1V0 119 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 H7C2Y5 167 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 CPT2P23786 658 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 FLI1Q01543 452 aaPredicted RBP12.75□□□□□ -0.37
MSH5-201ENST00000375703 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 SURF2Q15527 256 aaPredicted RBP12.75□□□□□ -0.37
MSH5-201ENST00000375703 RSPO1Q2MKA7 263 aaPredicted RBP12.75□□□□□ -0.37
MSH5-201ENST00000375703 SLC16A14Q7RTX9 510 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 DTX1Q86Y01 620 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 FOXRED2Q8IWF2 684 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 HAS2Q92819 552 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 ZNF385AQ96PM9 386 aaKnown RBP12.75□□□□□ -0.37
MSH5-201ENST00000375703 TM2D1Q9BX74 207 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 TMEM231Q9H6L2 316 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 LPAR3Q9UBY5 353 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 IFNA2P01563 188 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 PJVKQ0ZLH3 352 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 MST1LQ2TV78 715 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 C10orf91Q5T1B1 145 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 C10orf128Q5T292 105 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 H3F3CQ6NXT2 135 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 C6orf201Q7Z4U5 140 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 CCDC74BQ96LY2 380 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 PIGQQ9BRB3 760 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 CHST5Q9GZS9 411 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 HRH4Q9H3N8 390 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 CEP192Q8TEP8 1941 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 NPIPA2E9PIF3 369 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 NPIPA3F8WFD2 350 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 GABRR1P24046 479 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
MSH5-201ENST00000375703 RSPO4Q2I0M5 234 aaPredicted RBP12.75□□□□□ -0.37
MSH5-201ENST00000375703 RTL6Q6ICC9 239 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 GNRHR2Q96P88 292 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 DUSP23Q9BVJ7 150 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 UQCC1Q9NVA1 299 aa12.75□□□□□ -0.37
MSH5-201ENST00000375703 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 A0A087WZY1 265 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 SERPINA5P05154 406 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 DBHP09172 617 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 H2AFB1P0C5Y9 115 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 STARD6P59095 220 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 MRPL14Q6P1L8 145 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 SEMA6DQ8NFY4 1073 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 OR10Z1Q8NGY1 313 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 ADAMTS17Q8TE56 1095 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 SAT2Q96F10 170 aaPredicted RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 ZNF2Q9BSG1 426 aaPredicted RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 PLEK2Q9NYT0 353 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
MSH5-201ENST00000375703 MCTS1Q9ULC4 181 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 CARHSP1Q9Y2V2 147 aaKnown RBP12.74□□□□□ -0.37
MSH5-201ENST00000375703 M0R135 149 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms