RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SLC25A30Q5SVS4 291 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 ZNF574Q6ZN55 896 aaPredicted RBP15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 OR6K3Q8NGY3 331 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 SPSB1Q96BD6 273 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 NPAP1Q9NZP6 1156 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 A0A0D9SG52 128 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 GP1BAP07359 652 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 NANOS3P60323 173 aaKnown RBP15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 RFPL4BQ6ZWI9 263 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 SLC26A10Q8NG04 563 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 TMEM68Q96MH6 324 aa15.9■□□□□ 0.14
PTPDC1-202ENST00000375360 DDOSTP39656 456 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 GNG3P63215 75 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 TMEM200AQ86VY9 491 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 FAM109AQ8N4B1 249 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 FAM181AQ8N9Y4 354 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 RFESDQ8TAC1 157 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 PLEKHF2Q9H8W4 249 aa15.89■□□□□ 0.14
PTPDC1-202ENST00000375360 MED13LQ71F56 2210 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 UPK3AO75631 287 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 ZIC2O95409 532 aaPredicted RBP15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 TSC22D1Q15714 1073 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 DOCK7Q96N67 2140 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 PRELID3BQ9Y3B1 194 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 ABCA4P78363 2273 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 CTAG2O75638 210 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 PPP3CBP16298 524 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 GALP22466 123 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 TSPO2Q5TGU0 170 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 EXTL1Q92935 676 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 LOXL4Q96JB6 756 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 HEYLQ9NQ87 328 aaPredicted RBP15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 GHRLQ9UBU3 117 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 IFNA1P01562 189 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 CREB3L2Q70SY1 520 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 GVQW1Q8N7I0 195 aa15.89■□□□□ 0.13
PTPDC1-202ENST00000375360 MTCL1Q9Y4B5 1905 aaKnown RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 NKX6-3A6NJ46 265 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 GLAP06280 429 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 ANKRD34CP0C6C1 535 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 FUT3P21217 361 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 PRDX4Q13162 271 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 SP6Q3SY56 376 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 PDLIM3Q53GG5 364 aaPredicted RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 ARHGEF39Q8N4T4 335 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 ADPRHL1Q8NDY3 354 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 AMELYQ99218 206 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 FAM90A27PA6NNH2 459 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 IGKV3-11P04433 115 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 SHISA5Q8N114 240 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 TMEM105Q8N8V8 129 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 OR2AK2Q8NG84 335 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 RTN4IP1Q8WWV3 396 aaPredicted RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 UBL7Q96S82 380 aaPredicted RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 ADAT1Q9BUB4 502 aaKnown RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 DSPPQ9NZW4 1301 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 ANKRD33BA6NCL7 494 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 K7ESF4 209 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 CDC14BO60729 498 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 ZNF354AO60765 605 aaPredicted RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 DXOO77932 396 aaKnown RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 C22orf15Q8WYQ4 148 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 MESP1Q9BRJ9 268 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 TTTY12Q9BZ98 90 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 KCNJ16Q9NPI9 418 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 KIF25Q9UIL4 384 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 TCF20Q9UGU0 1960 aaKnown RBP15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 COL4A6Q14031 1691 aa15.88■□□□□ 0.13
PTPDC1-202ENST00000375360 HIKESHIQ53FT3 197 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 CDCP2Q5VXM1 449 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 OR8G2PQ6IF36 304 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TMEM251Q8N6I4 163 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TERB2Q8NHR7 220 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 WDFY2Q96P53 400 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TMPRSS13Q9BYE2 586 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TGIF2Q9GZN2 237 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 AKR7A2O43488 359 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 PIGPP57054 158 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 OR4A16Q8NH70 328 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 PRRX2Q99811 253 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 SF3B5Q9BWJ5 86 aaKnown RBP15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 FBXO7Q9Y3I1 522 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 A0A1W2PPV4 95 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TMEM200CA6NKL6 621 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TOR1AO14656 332 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TO15178 435 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 AQP8O94778 261 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TGM1P22735 817 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 ARTNQ5T4W7 220 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 ASB5Q8WWX0 329 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 ADAM19Q9H013 955 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 ESRP2Q9H6T0 727 aaKnown RBP15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 UTRNP46939 3433 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TMIGD3P0DMS9 266 aaPredicted RBP15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 SRPXP78539 464 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 CDC20Q12834 499 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 KRBOX4Q5JUW0 171 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 TMEM268Q5VZI3 342 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 FAM213BQ8TBF2 198 aa15.87■□□□□ 0.13
PTPDC1-202ENST00000375360 CNTNAP3BQ96NU0 1288 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms