RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SLC25A16P16260 332 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 PMELP40967 661 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 GNG3P63215 75 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 TPBGQ13641 420 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 CNN3Q15417 329 aaKnown RBP12.67□□□□□ -0.38
HSPG2-201ENST00000374673 MPPED2Q15777 294 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 UBE2V2Q15819 145 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 Q499Y3 187 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF420Q8TAQ5 688 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-201ENST00000374673 FCGR1BQ92637 280 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 UFD1Q92890 307 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF696Q9H7X3 374 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 FN3KRPQ9HA64 309 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 TREM2Q9NZC2 230 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 IGHV3-64DA0A0J9YX35 117 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 LRP5LA4QPB2 252 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF732B4DXR9 585 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 ALX3O95076 343 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 CD2P06729 351 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 GRPP07492 148 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 HSMCR30P0CW71 290 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 CPEP16870 476 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 GPR6P46095 362 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-201ENST00000374673 SOX2P48431 317 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 GPM6AP51674 278 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 DMRTC1Q5HYR2 192 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 C11orf53Q8IXP5 236 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 OR11L1Q8NGX0 322 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 THRSPQ92748 146 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 HPS1Q92902 700 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 TMEM106AQ96A25 262 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 ZCCHC4Q9H5U6 513 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 DCAF16Q9NXF7 216 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 SLC7A11Q9UPY5 501 aa12.66□□□□□ -0.38
HSPG2-201ENST00000374673 A0A096LNT2 108 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 IGKV1-9A0A0C4DH69 117 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 PQLC2LA1A4F0 135 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 TRIM64BA6NI03 449 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 A6NLC8 198 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 LRRC30A6NM36 301 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 TMEM178BH3BS89 294 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 ATF1P18846 271 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 NR4A2P43354 598 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 FUT6P51993 359 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 LIPKQ5VXJ0 399 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 PHC2Q8IXK0 858 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 DNAAF1Q8NEP3 725 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 OR5D14Q8NGL3 314 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 SPSB1Q96BD6 273 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 TIMD4Q96H15 378 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-201ENST00000374673 OR51I2Q9H344 312 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 C1orf123Q9NWV4 160 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 NPTNQ9Y639 398 aa12.65□□□□□ -0.38
HSPG2-201ENST00000374673 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 A0A087WXM4 84 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 PPIHO43447 177 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 SULT1B1O43704 296 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 SC5DO75845 299 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 FSTL3O95633 263 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 CYB5R3P00387 301 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 IRF2P14316 349 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 PRKACBP22694 351 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 AZGP1P25311 298 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 CFHR2P36980 270 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 HNRNPA0Q13151 305 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 TRAM1Q15629 374 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 ARMCX4Q5H9R4 360 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 ZNF529Q6P280 563 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 ZNF826PQ6ZT77 177 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 PEG10Q86TG7 708 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 ZNF573Q86YE8 665 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 SCCPDHQ8NBX0 429 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 TSPAN14Q8NG11 270 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 OR10Z1Q8NGY1 313 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 TRMT10AQ8TBZ6 339 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 RPL3LQ92901 407 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 RAB1CQ92928 201 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 BORCS8Q96FH0 119 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 OR14A2Q96R54 314 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 RNF7Q9UBF6 113 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 SF3B6Q9Y3B4 125 aaKnown RBP12.64□□□□□ -0.39
HSPG2-201ENST00000374673 WIPI2Q9Y4P8 454 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 AKAP9Q99996 3911 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 CR1P17927 2039 aa12.64□□□□□ -0.39
HSPG2-201ENST00000374673 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 TRBV5-7A0A0A0MS05 114 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms