RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 FAM219AQ8IW50 185 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 FNDC9Q8TBE3 224 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 CPT1CQ8TCG5 803 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 WNT5BQ9H1J7 359 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 MAB21L2Q9Y586 359 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 IGKV1-27A0A075B6S5 117 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 DNPH1O43598 174 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 MTRF1O75570 445 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 ZBTB25P24278 435 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 BEX5Q5H9J7 111 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 THOC7Q6I9Y2 204 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 SLC25A42Q86VD7 318 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 TUSC5Q8IXB3 177 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 HAS2Q92819 552 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 C1QTNF6Q9BXI9 259 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 TTTY12Q9BZ98 90 aa13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF701Q9NV72 531 aaPredicted RBP13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF107Q9UII5 783 aaPredicted RBP13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 NOSIPQ9Y314 301 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-202ENST00000374253 C9orf170A2RU37 121 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 SCGNO76038 276 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 CST2P09228 141 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 AMY2BP19961 511 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 S100A11P31949 105 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 SPEM2Q0P670 501 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 PDCD1Q15116 288 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 C3P1Q6ZMU1 363 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 FAM109AQ8N4B1 249 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 IL22RA1Q8N6P7 574 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 PP6455Q8WZ26 134 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 CPNE4Q96A23 557 aaPredicted RBP13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 FAM173AQ9BQD7 235 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 OR2H1Q9GZK4 316 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 SLC2A8Q9NY64 477 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 CYTIPO60759 359 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 MRPL33O75394 65 aaKnown RBP13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF205O95201 554 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 GSTP1P09211 210 aaKnown RBP13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 NAT2P11245 290 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 SPINK2P20155 84 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 LHX2P50458 406 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 PLGLB1Q02325 96 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF92Q03936 586 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 SCRN3Q0VDG4 424 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 DRAM2Q6UX65 266 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 LYG2Q86SG7 212 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 OR52H1Q8NGJ2 320 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 DYRK2Q92630 601 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 SLC7A10Q9NS82 523 aa13.92□□□□□ -0.18
CNKSR1-202ENST00000374253 IGKV1D-8A0A087WSZ0 117 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 EEF1E1-BLOC1S5C9J1V9 151 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF587BE7ETH6 402 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 GSK3AP49840 483 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 SNU13P55769 128 aaKnown RBP13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 TAF9Q16594 264 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 PABPC1L2AQ5JQF8 200 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 CPEB3Q8NE35 698 aaKnown RBP13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 CSNK2A3Q8NEV1 391 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 OR5M8Q8NGP6 311 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 PECRQ9BY49 303 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 TMPRSS13Q9BYE2 586 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 MFFQ9GZY8 342 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 OR6C6A6NF89 314 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 OR5H14A6NHG9 310 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 EFSO43281 561 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 SPDEFO95238 335 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 COMMD7Q86VX2 200 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 TMEM251Q8N6I4 163 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 COQ8AQ8NI60 647 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 MCTS1Q9ULC4 181 aaKnown RBP13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 TIMM10BQ9Y5J6 103 aa13.91□□□□□ -0.18
CNKSR1-202ENST00000374253 C13orf42A0A1B0GVH6 325 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 TERTO14746 1132 aaKnown RBP13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 HLA-HP01893 362 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 APOC1P02654 83 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 UBBP0CG47 229 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 ATP1B3P54709 279 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 CLDN18P56856 261 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 RIPPLY1Q0D2K3 151 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 SLC9A3R2Q15599 337 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 ESCO2Q56NI9 601 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 OR5H2Q8NGV7 314 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 ADAMTS17Q8TE56 1095 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 GPR87Q9BY21 358 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 OTOGLQ3ZCN5 2332 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 ZNF546Q86UE3 836 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 HOGA1Q86XE5 327 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 FAM89BQ8N5H3 189 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 TERB2Q8NHR7 220 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 C5orf66Q9H5L9 145 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 RDH8Q9NYR8 311 aa13.9□□□□□ -0.18
CNKSR1-202ENST00000374253 FAM221AA4D161 298 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 RP2O75695 350 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 OR3A2P47893 321 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 GMFBP60983 142 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 RAB14P61106 215 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 GK2Q14410 553 aaPredicted RBP13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 MPPED2Q15777 294 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms