RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SLC1A7O00341 560 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 CCDC159P0C7I6 412 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 C21orf33P30042 268 aaPredicted RBP13.42□□□□□ -0.26
HDHD3-202ENST00000374180 MDH2P40926 338 aaKnown RBP13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TGM4P49221 684 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 GNG3P63215 75 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TMEM155Q4W5P6 130 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 FAM201AQ5SY85 155 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TMEM42Q69YG0 159 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 C11orf53Q8IXP5 236 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 SPICQ8N5J4 248 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 BOLLQ8N9W6 283 aaKnown RBP13.42□□□□□ -0.26
HDHD3-202ENST00000374180 OR52N1Q8NH53 320 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 RAB39BQ96DA2 213 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 CNBD2Q96M20 576 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 FGF23Q9GZV9 251 aaPredicted RBP13.42□□□□□ -0.26
HDHD3-202ENST00000374180 COMMD4Q9H0A8 199 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 Q9H521 79 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF665Q9H7R5 613 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 GPR173Q9NS66 373 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 FKBP14Q9NWM8 211 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 HHLA2Q9UM44 414 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 PCDHB10Q9UN67 800 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 PPIAL4AQ9Y536 164 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 ANKRD61A6NGH8 418 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 OR5B21A6NL26 309 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TMEM212A6NML5 194 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF732B4DXR9 585 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 CDIPTO14735 213 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 LMX1BO60663 402 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 FSTL3O95633 263 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 SERPINA3P01011 423 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TGFAP01135 160 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 IGHV2-5P01817 119 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 FAM76BQ5HYJ3 339 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 RPL22L1Q6P5R6 122 aaKnown RBP13.42□□□□□ -0.26
HDHD3-202ENST00000374180 MUC20Q8N307 709 aaPredicted RBP13.42□□□□□ -0.26
HDHD3-202ENST00000374180 LINC01356Q8N9X3 169 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 OR5AK2Q8NH90 309 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 MYDGFQ969H8 173 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 C10orf35Q96D05 121 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TMEM165Q9HC07 324 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 YAE1D1Q9NRH1 226 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 TPRKBQ9Y3C4 175 aa13.42□□□□□ -0.26
HDHD3-202ENST00000374180 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.41□□□□□ -0.262e-7■■■□□ 17.2
HDHD3-202ENST00000374180 ZFPL1O95159 310 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 CDK1P06493 297 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 SCCPDHQ8NBX0 429 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 DEFB108BQ8NET1 73 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 OR13C3Q8NGS6 347 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 OR10AC1Q8NH08 325 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 RPL3LQ92901 407 aaKnown RBP13.41□□□□□ -0.26
HDHD3-202ENST00000374180 FGGYQ96C11 551 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 C1orf159Q96HA4 380 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 NR1H4Q96RI1 486 aaPredicted RBP13.41□□□□□ -0.26
HDHD3-202ENST00000374180 PDCD1LG2Q9BQ51 273 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 TLNRD1Q9H1K6 362 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 METTL17Q9H7H0 456 aaPredicted RBP13.41□□□□□ -0.26
HDHD3-202ENST00000374180 ERVK-18Q9QC07 812 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 ERGIC3Q9Y282 383 aa13.41□□□□□ -0.26
HDHD3-202ENST00000374180 MAGEA13PA6NCF6 341 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 B4DSR2 109 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 FAM157AC9JC47 383 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 MYL12BO14950 172 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 GATBO75879 557 aaKnown RBP13.4□□□□□ -0.26
HDHD3-202ENST00000374180 LHBP01229 141 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF16P17020 682 aaPredicted RBP13.4□□□□□ -0.26
HDHD3-202ENST00000374180 ZNF20P17024 532 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 CFHR2P36980 270 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 HOXA4Q00056 320 aaPredicted RBP13.4□□□□□ -0.26
HDHD3-202ENST00000374180 SFRP4Q6FHJ7 346 aaPredicted RBP13.4□□□□□ -0.26
HDHD3-202ENST00000374180 XAF1Q6GPH4 301 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 WDR82Q6UXN9 313 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 GCSAMQ8N6F7 178 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 LRRC29Q8WV35 223 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 PP6455Q8WZ26 134 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 CHST5Q9GZS9 411 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 OR51I2Q9H344 312 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 TRIM36Q9NQ86 728 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 SLC7A11Q9UPY5 501 aa13.4□□□□□ -0.26
HDHD3-202ENST00000374180 A6NHS1 94 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 A8MV72 311 aaPredicted RBP13.39□□□□□ -0.27
HDHD3-202ENST00000374180 C3orf80F5H4A9 247 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 DENRO43583 198 aaKnown RBP13.39□□□□□ -0.27
HDHD3-202ENST00000374180 CD80P33681 288 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 CDK5R1Q15078 307 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 UBE2V2Q15819 145 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 KCNJ8Q15842 424 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 ZNF404Q494X3 552 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 FAM166AQ6J272 317 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 ZNF573Q86YE8 665 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 ZNF485Q8NCK3 441 aa13.39□□□□□ -0.27
HDHD3-202ENST00000374180 ADAT3Q96EY9 351 aaPredicted RBP13.39□□□□□ -0.27
HDHD3-202ENST00000374180 TECTBQ96PL2 329 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms