RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SIGLEC5O15389 551 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 NKX2-8O15522 239 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 SLC34A2O95436 690 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 CFDP00746 253 aaPredicted RBP6.9□□□□□ -1.3
HERC4-202ENST00000373700 HLA-HP01893 362 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 SULT1A3P0DMM9 295 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 SULT1A4P0DMN0 295 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 DSCR4P56555 118 aaPredicted RBP6.9□□□□□ -1.3
HERC4-202ENST00000373700 TRA2AQ13595 282 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERC4-202ENST00000373700 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.3
HERC4-202ENST00000373700 ELFN2Q5R3F8 820 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 BPHLQ86WA6 291 aaPredicted RBP6.9□□□□□ -1.3
HERC4-202ENST00000373700 CDH26Q8IXH8 852 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 SCGB1C1Q8TD33 95 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 MS4A3Q96HJ5 214 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 ZNF75AQ96N20 296 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 TRIB1Q96RU8 372 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 CLCC1Q96S66 551 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 RPS10P5Q9NQ39 176 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 ZNF71Q9NQZ8 489 aaPredicted RBP6.9□□□□□ -1.3
HERC4-202ENST00000373700 EMC3Q9P0I2 261 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 FOXJ2Q9P0K8 574 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 ST3GAL6Q9Y274 331 aa6.9□□□□□ -1.3
HERC4-202ENST00000373700 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 FTCDNL1E5RQL4 147 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 SNRNP70P08621 437 aaKnown RBP6.9□□□□□ -1.31
HERC4-202ENST00000373700 ZNF32P17041 273 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 FCGR2CP31995 323 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 ZNF626Q68DY1 528 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 CLEC9AQ6UXN8 241 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 LYG2Q86SG7 212 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 CATSPERDQ86XM0 798 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 ADAM19Q9H013 955 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 MAGT1Q9H0U3 335 aa6.9□□□□□ -1.31
HERC4-202ENST00000373700 SHANK1Q9Y566 2161 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 A0A0G2JK05 382 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 LOC101059948A0A1B0GTJ6 334 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ZNF814B7Z6K7 855 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 SNAPC5O75971 98 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 BPNT1O95861 308 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 IGF2P01344 180 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 KLK2P20151 261 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TUBG1P23258 451 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 SUMO3P55854 103 aaPredicted RBP6.89□□□□□ -1.31
HERC4-202ENST00000373700 EFNB1P98172 346 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 SNTB1Q13884 538 aaKnown RBP6.89□□□□□ -1.31
HERC4-202ENST00000373700 SSPNQ14714 243 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 AANATQ16613 207 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TMEM200AQ86VY9 491 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 CARFQ8N187 725 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 CCDC71LQ8N9Z2 235 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ZBTB44Q8NCP5 570 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TMEM104Q8NE00 496 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ST8SIA2Q92186 375 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 APH1AQ96BI3 265 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 INTS12Q96CB8 462 aaKnown RBP6.89□□□□□ -1.31
HERC4-202ENST00000373700 C20orf24Q9BUV8 137 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 UFSP2Q9NUQ7 469 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 WNK2Q9Y3S1 2297 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 SMCO3A2RU48 225 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 HSD17B6O14756 317 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 RGS13O14921 159 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
HERC4-202ENST00000373700 ITGB2P05107 769 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 VSIG8P0DPA2 414 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 PTGFRP43088 359 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 HAAOP46952 286 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 GGTLC2Q14390 218 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ATPAF1Q5TC12 328 aaPredicted RBP6.89□□□□□ -1.31
HERC4-202ENST00000373700 CDCP2Q5VXM1 449 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TMEM178AQ8NBL3 297 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 CXorf58Q96LI9 332 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 NARFLQ9H6Q4 476 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ZFP64Q9NPA5 681 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 C1orf123Q9NWV4 160 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TIMM10BQ9Y5J6 103 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ATRXP46100 2492 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 IGKV1D-43A0A0B4J1Z2 117 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 A0A1W2PQD3 144 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TTRP02766 147 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 IL5P05113 134 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 SERPINA7P05543 415 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 RPS11P62280 158 aaKnown RBP eCLIP6.89□□□□□ -1.31
HERC4-202ENST00000373700 TSPO2Q5TGU0 170 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 ACOT7LQ6ZUV0 252 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 FAM122BQ7Z309 247 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 KCNRGQ8N5I3 272 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 OR2M3Q8NG83 312 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 FOXB1Q99853 325 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 RAB33BQ9H082 229 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 TRAPPC2LQ9UL33 140 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 SPEGQ15772 3267 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 KIAA1671Q9BY89 1806 aa6.89□□□□□ -1.31
HERC4-202ENST00000373700 FAM208BQ5VWN6 2430 aa6.88□□□□□ -1.31
HERC4-202ENST00000373700 A0A0J9YW62 118 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms