RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 CAPGP40121 348 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 GPM6AP51674 278 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 OR12D2P58182 307 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 SEC61A1P61619 476 aaKnown RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 GNB2P62879 340 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 ADARB1P78563 741 aaKnown RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 GALEQ14376 348 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 SMN1Q16637 294 aaKnown RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 CLVS2Q5SYC1 327 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 SFRP4Q6FHJ7 346 aaPredicted RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 WDR82Q6UXN9 313 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 MOB3CQ70IA8 216 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 LHFPL3Q86UP9 236 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 C8orf59Q8N0T1 100 aaPredicted RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 SYS1Q8N2H4 156 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 PRSS35Q8N3Z0 413 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 GCSAMQ8N6F7 178 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 OR5A2Q8NGI9 324 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 OR52I1Q8NGK6 324 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 OR14K1Q8NGZ2 314 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 CNIH3Q8TBE1 160 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 C4orf36Q96KX1 117 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 SSBP3Q9BWW4 388 aaPredicted RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 MRPS18AQ9NVS2 196 aaKnown RBP10.06□□□□□ -0.8
HDAC8-201ENST00000373554 ERVK13-1Q9NX77 482 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 OR5V1Q9UGF6 321 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 HSPE1-MOB4S4R3N1 261 aa10.06□□□□□ -0.8
HDAC8-201ENST00000373554 PPIAL4CA0A0B4J2A2 164 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 ZNF732B4DXR9 585 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 J3QLI3 93 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 NDUFA2O43678 99 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 CFHR2P36980 270 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 KIR3DL2P43630 455 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 PITPNBP48739 271 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 MRPL28Q13084 256 aaKnown RBP10.05□□□□□ -0.8
HDAC8-201ENST00000373554 MICBQ29980 383 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 FAM76BQ5HYJ3 339 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 TMEM244Q5VVB8 128 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 FDX2Q6P4F2 183 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 Q6ZSR3 168 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 EGFL6Q8IUX8 553 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 C11orf53Q8IXP5 236 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 SCCPDHQ8NBX0 429 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 OR10Z1Q8NGY1 313 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 OR2G2Q8NGZ5 317 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 RPL3LQ92901 407 aaKnown RBP10.05□□□□□ -0.8
HDAC8-201ENST00000373554 PELI1Q96FA3 418 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 FGF23Q9GZV9 251 aaPredicted RBP10.05□□□□□ -0.8
HDAC8-201ENST00000373554 METTL17Q9H7H0 456 aaPredicted RBP10.05□□□□□ -0.8
HDAC8-201ENST00000373554 CLN8Q9UBY8 286 aa10.05□□□□□ -0.8
HDAC8-201ENST00000373554 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
HDAC8-201ENST00000373554 ANKRD61A6NGH8 418 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 H3BSH0 61 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 PHF1O43189 567 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 ADAM20O43506 726 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 GATBO75879 557 aaKnown RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 LHBP01229 141 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 MUC1P15941 1255 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 EGR1P18146 543 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 MYL12AP19105 171 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 ZFP36P26651 326 aaKnown RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 DCKP27707 260 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 CCR9P51686 369 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 HOXA4Q00056 320 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 DMRTC1Q5HYR2 192 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 TEX36Q5VZQ5 186 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 TMEM42Q69YG0 159 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 HAGHLQ6PII5 290 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 FAM90A1Q86YD7 464 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 ZNF676Q8N7Q3 588 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 C12orf43Q96C57 262 aaKnown RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 JAM3Q9BX67 310 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 VCX3BQ9H321 246 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 OR51I2Q9H344 312 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 FGF20Q9NP95 211 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 GPR173Q9NS66 373 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 FRRS1LQ9P0K9 344 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 DNAJB11Q9UBS4 358 aa10.04□□□□□ -0.8
HDAC8-201ENST00000373554 POLR3KQ9Y2Y1 108 aaPredicted RBP10.04□□□□□ -0.8
HDAC8-201ENST00000373554 IGHV3OR15-7A0A075B7D8 119 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 A6NIN4 97 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 KIAA1324LA8MWY0 1029 aaPredicted RBP10.03□□□□□ -0.8
HDAC8-201ENST00000373554 TMPRSS2O15393 492 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 SERPINA3P01011 423 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 GYPAP02724 150 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 ISG15P05161 165 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 RPSAP08865 295 aaKnown RBP10.03□□□□□ -0.8
HDAC8-201ENST00000373554 GNAO1P09471 354 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 NPY4RP50391 375 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 GBX2P52951 348 aaPredicted RBP10.03□□□□□ -0.8
HDAC8-201ENST00000373554 NANOS3P60323 173 aaKnown RBP10.03□□□□□ -0.8
HDAC8-201ENST00000373554 GMFBP60983 142 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 SCGB2A2Q13296 93 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 MED21Q13503 144 aa10.03□□□□□ -0.8
HDAC8-201ENST00000373554 ALKBH1Q13686 389 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms