RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 EDDM3BP56851 147 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 PCBP3P57721 371 aaKnown RBP12.77□□□□□ -0.37
LMX1B-202ENST00000373474 ERHP84090 104 aaKnown RBP12.77□□□□□ -0.37
LMX1B-202ENST00000373474 ST3GAL2Q16842 350 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 RTL8BQ17RB0 113 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 MIDNQ504T8 468 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 OTPQ5XKR4 325 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 OR5AS1Q8N127 324 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 PPP1R3CQ9UQK1 317 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 SH2D1BO14796 132 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 PPM1DO15297 605 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 ZGLP1P0C6A0 271 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 PI3P19957 117 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 ABCD3P28288 659 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 C20orf141Q9NUB4 165 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 LRRC30A6NM36 301 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 M0R1X1 148 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 TNFSF11O14788 317 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 THBS4P35443 961 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 RBPJQ06330 500 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 FOXF1Q12946 379 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 RNASEKQ6P5S7 137 aaKnown RBP12.76□□□□□ -0.37
LMX1B-202ENST00000373474 DNAJB12Q9NXW2 375 aaKnown RBP12.76□□□□□ -0.37
LMX1B-202ENST00000373474 OR2J2O76002 312 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 CNIH1O95406 144 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 OR5G3P0C626 314 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 INSL4Q14641 139 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM241Q24JQ0 296 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 STUMQ69YW2 141 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 Q6ZN92 141 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM272A0A1B0GTI8 110 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 PIGPP57054 158 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 OR2A2Q6IF42 318 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 STPG2Q8N412 459 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 AMER3Q8N944 861 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 C8orf44Q96CB5 159 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 RALYQ9UKM9 306 aaKnown RBP12.76□□□□□ -0.37
LMX1B-202ENST00000373474 POLDIP2Q9Y2S7 368 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 OR5H8P0DN80 308 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 GFERP55789 205 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 SPCS3P61009 180 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM128Q5BJH2 165 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 LANCL2Q9NS86 450 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 DECR2Q9NUI1 292 aa12.76□□□□□ -0.37
LMX1B-202ENST00000373474 LY86O95711 162 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 PKIAP61925 76 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 PRICKLE4Q2TBC4 344 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 PLEKHB1Q9UF11 243 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-202ENST00000373474 NAT8BQ9UHF3 227 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 LILRA5A6NI73 299 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 K7ERU9 68 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-202ENST00000373474 HLXQ14774 488 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SLC16A13Q7RTY0 426 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 ZDHHC22Q8N966 263 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 GNB4Q9HAV0 340 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 MMP25Q9NPA2 562 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM9BQ9NQ34 198 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SIRT3Q9NTG7 399 aaPredicted RBP12.75□□□□□ -0.37
LMX1B-202ENST00000373474 HDGFL3Q9Y3E1 203 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 WSB1Q9Y6I7 421 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SHHQ15465 462 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 COX19Q49B96 90 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF573Q86YE8 665 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SPICQ8N5J4 248 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 ATG101Q9BSB4 218 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 IGHV3-15A0A0B4J1V0 119 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 A6NDN8 102 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 CISD3P0C7P0 127 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SULT1A3P0DMM9 295 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SULT1A4P0DMN0 295 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 OPRM1P35372 400 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 GPR12P47775 334 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 GSG1Q2KHT4 349 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 C5orf49A4QMS7 147 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SERPINE3A8MV23 424 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 IAPPP10997 89 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 GLULP15104 373 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SCAND1P57086 179 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 LINC01555Q8NAE3 123 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 SMIM12Q96EX1 92 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
LMX1B-202ENST00000373474 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-202ENST00000373474 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 PTHLHP12272 177 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF25P17030 456 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-202ENST00000373474 TTC9Q92623 222 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 FAAP24Q9BTP7 215 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 TIMM9Q9Y5J7 89 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OPN1MWP04001 364 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 PPOXP50336 477 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 A0A1W2PNV4 684 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 FPR2P25090 351 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms