RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 M0R296 226 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 CPN1P15169 458 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 DUSP1P28562 367 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 P2RX3P56373 397 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 RAC3P60763 192 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 B2MP61769 119 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 SPEM2Q0P670 501 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 RSU1Q15404 277 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 TSPO2Q5TGU0 170 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 TMEM123Q8N131 208 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 SPICQ8N5J4 248 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 RNF138Q8WVD3 245 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 FOXB1Q99853 325 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 PRRT1Q99946 306 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 NOSIPQ9Y314 301 aaKnown RBP10.28□□□□□ -0.76
PDE6C-201ENST00000371447 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
PDE6C-201ENST00000371447 NPIPB13A6NJU9 1138 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 NPIPB4C9JG80 1138 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 ETV2O00321 342 aaPredicted RBP10.27□□□□□ -0.76
PDE6C-201ENST00000371447 MRPL33O75394 65 aaKnown RBP10.27□□□□□ -0.76
PDE6C-201ENST00000371447 SFTPBP07988 381 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 SP9P0CG40 484 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 HOXA6P31267 233 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 SCAND1P57086 179 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 ESCO2Q56NI9 601 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 CLVS2Q5SYC1 327 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 PGAP1Q75T13 922 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 TUSC5Q8IXB3 177 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 PNPLA2Q96AD5 504 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 ZNF75AQ96N20 296 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 SLC25A21Q9BQT8 299 aaPredicted RBP10.27□□□□□ -0.76
PDE6C-201ENST00000371447 GSX2Q9BZM3 304 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 METTL8Q9H825 291 aaKnown RBP10.27□□□□□ -0.76
PDE6C-201ENST00000371447 SHANK1Q9Y566 2161 aa10.27□□□□□ -0.76
PDE6C-201ENST00000371447 NBASA2RRP1 2371 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 A0A087WZY1 265 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 TMEM14DPA8MWL7 114 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 DHRS3O75911 302 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 RLN2P04090 185 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 CASRP41180 1078 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 QRFPP83859 136 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 PIGYQ3MUY2 71 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 CHRFAM7AQ494W8 412 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 LY6G6FQ5SQ64 297 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 ELP2Q6IA86 826 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 MOB3CQ70IA8 216 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 SKA3Q8IX90 412 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 SEMA6DQ8NFY4 1073 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 OR2V1Q8NHB1 315 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 NARS2Q96I59 477 aaKnown RBP10.27□□□□□ -0.77
PDE6C-201ENST00000371447 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 IGKV1D-8A0A087WSZ0 117 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 LOC390937A0A1W2PQ73 354 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 OR14I1A6ND48 311 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 VAMP5O95183 116 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 SRD5A2P31213 254 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 LUMP51884 338 aaPredicted RBP10.27□□□□□ -0.77
PDE6C-201ENST00000371447 PSG4Q00888 419 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 SRSF6Q13247 344 aaKnown RBP10.27□□□□□ -0.77
PDE6C-201ENST00000371447 SSPNQ14714 243 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 OR1C1Q15619 314 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 GSG1LQ6UXU4 331 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 GGNQ86UU5 652 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 NAXDQ8IW45 347 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 LRRC20Q8TCA0 184 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 PSMF1Q92530 271 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 OR2S2Q9NQN1 319 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 NPTNQ9Y639 398 aa10.27□□□□□ -0.77
PDE6C-201ENST00000371447 CACNA1DQ01668 2161 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 GJE1A6NN92 205 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 ATP6V1G2-DDX39BF2Z307 99 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
PDE6C-201ENST00000371447 ICAM2P13598 275 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 SERPINF1P36955 418 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 S100A10P60903 97 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 GALNT11Q8NCW6 608 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 ZC3H10Q96K80 434 aaKnown RBP10.26□□□□□ -0.77
PDE6C-201ENST00000371447 TAAR9Q96RI9 348 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 LDAHQ9H6V9 325 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 CHMP1AQ9HD42 196 aaPredicted RBP10.26□□□□□ -0.77
PDE6C-201ENST00000371447 B3GNT2Q9NY97 397 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 EXPH5Q8NEV8 1989 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 SPTA1P02549 2419 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 C9orf170A2RU37 121 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 ARGFXA6NJG6 315 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 OR2A4O95047 310 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 SERPINA7P05543 415 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 B3GALT5-AS1P59052 145 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF92Q03936 586 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 MEF2DQ14814 521 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 PABPC1L2AQ5JQF8 200 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 HES3Q5TGS1 186 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 DNM1P46Q6ZS02 220 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 LYPD6Q86Y78 171 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 SULF2Q8IWU5 870 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 OR56B1Q8NGI3 324 aa10.26□□□□□ -0.77
PDE6C-201ENST00000371447 OR1F12Q8NHA8 337 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms