RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZXDAP98168 799 aa19.84■□□□□ 0.77
TM9SF3-201ENST00000371142 SSBP1Q04837 148 aaKnown RBP19.84■□□□□ 0.77
TM9SF3-201ENST00000371142 FBXO34Q9NWN3 711 aa19.84■□□□□ 0.77
TM9SF3-201ENST00000371142 RER1O15258 196 aa19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 PEX11BO96011 259 aa19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 NME1P15531 152 aaKnown RBP19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 CA6P23280 308 aa19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 CEACAM6P40199 344 aa19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 OR2A2Q6IF42 318 aa19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 SIGLEC7Q9Y286 467 aa19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 CNN1P51911 297 aaKnown RBP19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 RPP25Q9BUL9 199 aaKnown RBP19.83■□□□□ 0.77
TM9SF3-201ENST00000371142 TMEM272A0A1B0GTI8 110 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 TCAPO15273 167 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 SDHBP21912 280 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 ABI3BPQ7Z7G0 1075 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 P4HTMQ9NXG6 502 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 SH2D7A6NKC9 451 aaPredicted RBP19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 CRYABP02511 175 aaKnown RBP19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 SPEM2Q0P670 501 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 ANKRD37Q7Z713 158 aa19.83■□□□□ 0.76
TM9SF3-201ENST00000371142 CTSVO60911 334 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 ARHGAP5-AS1Q96IT6 56 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 ZDHHC11Q9H8X9 412 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 CROCCQ5TZA2 2017 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 LIMS3P0CW19 117 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 LIMS4P0CW20 117 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 ERVFC1-1P60608 527 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 C11orf42Q8N5U0 333 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 HES4Q9HCC6 221 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 OR4C3Q8NH37 302 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 GNG3P63215 75 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 Q56UQ5 140 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 MRGPREQ86SM8 312 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 MISP3Q96FF7 219 aa19.82■□□□□ 0.76
TM9SF3-201ENST00000371142 CDC14BO60729 498 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 TNFRSF1AP19438 455 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 KRTDAPP60985 99 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 VMA21Q3ZAQ7 101 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 DOK1Q99704 481 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 IL20Q9NYY1 176 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 SMIM17P0DL12 118 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 FUT7Q11130 342 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 ZNF774Q6NX45 483 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 TMPRSS5Q9H3S3 457 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 DNAJB12Q9NXW2 375 aaKnown RBP19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 LAMB1P07942 1786 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 NKX2-2O95096 273 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 SUMO1P63165 101 aaKnown RBP19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 KISS1Q15726 138 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 C11orf87Q6NUJ2 197 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 NGFP01138 241 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 FZD5Q13467 585 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 TOMM34Q15785 309 aaPredicted RBP19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 TMEFF2Q9UIK5 374 aaPredicted RBP19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
TM9SF3-201ENST00000371142 SLC16A12Q6ZSM3 486 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 TJP1Q07157 1748 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 CCL2P13500 99 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 AANATQ16613 207 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 PLA1AQ53H76 456 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 C16orf47Q6ZP98 133 aaPredicted RBP19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 TSPAN32Q96QS1 320 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 C19orf43Q9BQ61 176 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 RHOFQ9HBH0 211 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 PTTG1IPP53801 180 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 CDK5Q00535 292 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 MICBQ29980 383 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 PRICKLE4Q2TBC4 344 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 GLDNQ6ZMI3 551 aaPredicted RBP19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 TMPRSS11FQ6ZWK6 438 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 C12orf10Q9HB07 376 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 EPPINO95925 133 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 CTF1Q16619 201 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 LINC01555Q8NAE3 123 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 SPSB1Q96BD6 273 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 FAM90A27PA6NNH2 459 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 FPR2P25090 351 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 MCHR2Q969V1 340 aa19.8■□□□□ 0.76
TM9SF3-201ENST00000371142 ST8SIA5O15466 376 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 FCGR3BO75015 233 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 FAAP24Q9BTP7 215 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 ALS2Q96Q42 1657 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 TRAV17A0A0B4J275 112 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 SLC25A1P53007 311 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 DUS4LO95620 317 aaKnown RBP19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 HOXB3P14651 431 aaPredicted RBP19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 ZNF574Q6ZN55 896 aaPredicted RBP19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 RFESDQ8TAC1 157 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 PRR35P0CG20 571 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 WNT3P56703 355 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 A0A1B0GTH9 108 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 ADAM20O43506 726 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 SLC37A1P57057 533 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 KIAA1958Q8N8K9 716 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 DEFB124Q8NES8 71 aa19.79■□□□□ 0.76
TM9SF3-201ENST00000371142 MASP2O00187 686 aa19.78■□□□□ 0.76
TM9SF3-201ENST00000371142 S100A4P26447 101 aaKnown RBP19.78■□□□□ 0.76
TM9SF3-201ENST00000371142 SPINK9Q5DT21 86 aa19.78■□□□□ 0.76
TM9SF3-201ENST00000371142 LYG1Q8N1E2 194 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms