RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 MED29Q9NX70 200 aa8.53□□□□□ -1.04
LRRC40-201ENST00000370952 SRPK3Q9UPE1 567 aa8.53□□□□□ -1.04
LRRC40-201ENST00000370952 C14orf166Q9Y224 244 aaKnown RBP8.53□□□□□ -1.04
LRRC40-201ENST00000370952 MYO9BQ13459 2157 aa8.53□□□□□ -1.04
LRRC40-201ENST00000370952 SHANK1Q9Y566 2161 aa8.53□□□□□ -1.04
LRRC40-201ENST00000370952 LTBP2Q14767 1821 aa8.53□□□□□ -1.04
LRRC40-201ENST00000370952 DOCK8Q8NF50 2099 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 A0A087X0M5 115 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 A0A1B0GX30 115 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 FIGNL2A6NMB9 653 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 ZNF878C9JN71 531 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 H0YL77 283 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 CLDN4O14493 209 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 SLC31A2O15432 143 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 SCGNO76038 276 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 IL33O95760 270 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 FABP4P15090 132 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 CRABP1P29762 137 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 DDTP30046 118 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 TAGLN2P37802 199 aaKnown RBP8.52□□□□□ -1.04
LRRC40-201ENST00000370952 UCP2P55851 309 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 NHLH2Q02577 135 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 HAGHQ16775 308 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 KLHL24Q6TFL4 600 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 REC114Q7Z4M0 266 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 COMMD1Q8N668 190 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 RAB39BQ96DA2 213 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 SLAMF6Q96DU3 332 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 TCTN2Q96GX1 697 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 FAM71F1Q96KD3 344 aaPredicted RBP8.52□□□□□ -1.04
LRRC40-201ENST00000370952 TCEAL2Q9H3H9 227 aaPredicted RBP8.52□□□□□ -1.04
LRRC40-201ENST00000370952 PPP4R1LQ9P1A2 415 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 ANAPC10Q9UM13 185 aa8.52□□□□□ -1.04
LRRC40-201ENST00000370952 TMED7-TICAM2A0A0A6YYA0 188 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 BTBD17A6NE02 478 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 CDRT15L2A8MXV6 281 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 PLPP3O14495 311 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 MBPP02686 304 aaPredicted RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 TRGC2P03986 189 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 CTNNB1P35222 781 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 APOBEC1P41238 236 aaKnown RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 RABIFP47224 123 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 ERVFRD-1P60508 538 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 LSM6P62312 80 aaKnown RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 ELOBQ15370 118 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 CHRFAM7AQ494W8 412 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 OR5AS1Q8N127 324 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 EMG1Q92979 244 aaKnown RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 MMABQ96EY8 250 aaPredicted RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 GALNT14Q96FL9 552 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 WDR92Q96MX6 357 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 S100A13Q99584 98 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 EMC6Q9BV81 110 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
LRRC40-201ENST00000370952 TMEM184BQ9Y519 407 aaPredicted RBP8.52□□□□□ -1.05
LRRC40-201ENST00000370952 H3BQ15 152 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 CYB5BO43169 146 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 PLRG1O43660 514 aaKnown RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 IFNA21P01568 189 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 HEXBP07686 556 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 CELA2BP08218 269 aaPredicted RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 GP1BBP13224 206 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 MAS1LP35410 378 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 MMP16P51512 607 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 SLC26A5P58743 744 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 NFATC4Q14934 902 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 SSX2Q16385 188 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 C4orf17Q53FE4 359 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 ABHD12BQ7Z5M8 362 aaPredicted RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 STX12Q86Y82 276 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 OR51T1Q8NGJ9 327 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 KCNG3Q8TAE7 436 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 PHOSPHO2Q8TCD6 241 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 DAZLQ92904 295 aaKnown RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 MISP3Q96FF7 219 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 ZNF2Q9BSG1 426 aaPredicted RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 SDHAF3Q9NRP4 125 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 PRODH2Q9UF12 536 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 TBX21Q9UL17 535 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 BORCS7-ASMTA0A0B4J1R7 106 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 SEC14L6B5MCN3 397 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 ZNF587BE7ETH6 402 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 PPP1R2P9O14990 202 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 FKTNO75072 461 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 QDPRP09417 244 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 TAS2R60P59551 318 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 UBE2KP61086 200 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 IGLV3-21P80748 117 aaPredicted RBP8.51□□□□□ -1.05
LRRC40-201ENST00000370952 TFF2Q03403 129 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 TSPO2Q5TGU0 170 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 TANGO2Q6ICL3 276 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 C1QL2Q7Z5L3 287 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 OOSP2Q86WS3 158 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 HIST3H2BBQ8N257 126 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 OR10S1Q8NGN2 331 aa8.51□□□□□ -1.05
LRRC40-201ENST00000370952 RNF133Q8WVZ7 376 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms