RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZNF433Q8N7K0 673 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 YIPF7Q8N8F6 280 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR2AJ1Q8NGZ0 328 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR52N5Q8NH56 324 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 AKR7LQ8NHP1 331 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RPS4Y2Q8TD47 263 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ASB17Q8WXJ9 295 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SLC7A6Q92536 515 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZFP3Q96NJ6 502 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 WNT5BQ9H1J7 359 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR51E2Q9H255 320 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 C1orf198Q9H425 327 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RNF167Q9H6Y7 350 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 NOX3Q9HBY0 568 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CENPMQ9NSP4 180 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 B3GNT2Q9NY97 397 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RABL2AQ9UBK7 228 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 IKZF2Q9UKS7 526 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PROCRQ9UNN8 238 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 LRP12Q9Y561 859 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TMEM14AQ9Y6G1 99 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CHD6Q8TD26 2715 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR6C6A6NF89 314 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR4C45A6NMZ5 311 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CCRL2O00421 344 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PHYHO14832 338 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PLPP2O43688 288 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SYNGR3O43761 229 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 LYZL6O75951 148 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 KRT8P05787 483 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TACSTD2P09758 323 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ANXA7P20073 488 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 COX5AP20674 150 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TGFBR1P36897 503 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CA7P43166 264 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CRYBB2P43320 205 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MAGEB1P43366 347 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TGM4P49221 684 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PRKXP51817 358 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CAPZA1P52907 286 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GBX2P52951 348 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 ACTA2P62736 377 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ACTG2P63267 376 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 BDH1Q02338 343 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SLC3A1Q07837 685 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 AQP6Q13520 282 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 INSL4Q14641 139 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CDK5R1Q15078 307 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 IGFBP7Q16270 282 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 KRTAP27-1Q3LI81 207 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RNASE12Q5GAN4 147 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF774Q6NX45 483 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 KCTD18Q6PI47 426 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 DEGS2Q6QHC5 323 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ARL9Q6T311 187 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TMEM91Q6ZNR0 172 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SLC16A14Q7RTX9 510 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MRGPRGQ86SM5 289 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CATSPERDQ86XM0 798 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RDH10Q8IZV5 341 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PRSS35Q8N3Z0 413 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 WDR31Q8NA23 367 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CPEB3Q8NE35 698 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 GJC3Q8NFK1 279 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR13C5Q8NGS8 318 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR2G2Q8NGZ5 317 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RGP1Q92546 391 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 TMEM203Q969S6 136 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 DGCR14Q96DF8 476 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 PGLYRP3Q96LB9 341 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF75AQ96N20 296 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PDCD1LG2Q9BQ51 273 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SFXN3Q9BWM7 321 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MROQ9BYG7 248 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR2H1Q9GZK4 316 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PALMDQ9NP74 551 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 NDUFB11Q9NX14 153 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF319Q9P2F9 582 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ENPP5Q9UJA9 477 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SLC22A13Q9Y226 551 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 POLR1DQ9Y2S0 133 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MEMO1Q9Y316 297 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TIMM10BQ9Y5J6 103 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 DMRT1Q9Y5R6 373 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SMG1Q96Q15 3661 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 FLNCQ14315 2725 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 LOC100509620A0A075B734 347 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 A0A1W2PR80 420 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 HSPB2A8KAH6 182 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 H3BMQ9 156 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CCL21O00585 134 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TXNL1O43396 289 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SGCEO43556 437 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SMPD2O60906 423 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF254O75437 659 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RAD51DO75771 328 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PRB1P04280 392 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 H2BFMP0C1H6 154 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF12P17014 697 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 M6PRP20645 277 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms