RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SLC25A26Q70HW3 274 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 NUFIP2Q7Z417 695 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 STX12Q86Y82 276 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PRR18Q8N4B5 295 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 BHLHE23Q8NDY6 225 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 GCDHQ92947 438 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 RAB39BQ96DA2 213 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SEH1LQ96EE3 360 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CNTNAP3BQ96NU0 1288 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TRAF4Q9BUZ4 470 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 C1QTNF6Q9BXI9 259 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR14J1Q9UGF5 321 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ZMIZ1Q9ULJ6 1067 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ST3GAL6Q9Y274 331 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PCDHGA9Q9Y5G4 932 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ASXL3Q9C0F0 2248 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM186AA6NE01 2351 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 MEIKINA0A087WXM9 373 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 LOC102723996A0A087X1L8 192 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TERTO14746 1132 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CNOT4O95628 575 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SP1P08047 785 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ADRB1P08588 477 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PGA4P0DJD7 388 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PGA3P0DJD8 388 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 RRASP10301 218 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ZP3P21754 424 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CD96P40200 585 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 KIR3DL2P43630 455 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 RPL23AP62750 156 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 EFNB1P98172 346 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FLI1Q01543 452 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 GUCA2AQ02747 115 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 MSMO1Q15800 293 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FAAP20Q6NZ36 180 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 BEND4Q6ZU67 534 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 LYG2Q86SG7 212 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 Q8IYB0 196 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 RFLNBQ8N5W9 214 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 RELL2Q8NC24 303 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SEC22AQ96IW7 307 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 UCN2Q96RP3 112 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 DLL4Q9NR61 685 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM38BQ9NVV0 291 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CYB5R1Q9UHQ9 305 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 THADAQ6YHU6 1953 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ALPK2Q86TB3 2170 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TUBAL3A6NHL2 446 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 K7EPK0 472 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CDK2AP1O14519 115 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2F2O95006 317 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CRYAAP02489 173 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 GLAP06280 429 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CELA2AP08217 269 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5H8P0DN80 308 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FUT3P21217 361 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ERVK-16P61578 105 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 GNG3P63215 75 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CFHR1Q03591 330 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2F1Q13607 317 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF718Q3SXZ3 478 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 LCN10Q6JVE6 187 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC25A47Q6Q0C1 308 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FBXW12Q6X9E4 464 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 NAA40Q86UY6 237 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM200AQ86VY9 491 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM71E2Q8N5Q1 922 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF441Q8N8Z8 693 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR10AC1Q8NH08 325 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SECTM1Q8WVN6 248 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF2Q9BSG1 426 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PBDC1Q9BVG4 233 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 GPR35Q9HC97 309 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OBSL1O75147 1896 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 TRBV5-7A0A0A0MS05 114 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 A0A0U1RQV5 110 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 LNP1A1A4G5 178 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PYCARD-AS1I3L0S3 204 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 SH2D1BO14796 132 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CDC14BO60729 498 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 OR8U9P0C7N5 309 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 HAAOP46952 286 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 LUMP51884 338 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 IAH1Q2TAA2 248 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM128Q5BJH2 165 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC25A53Q5H9E4 307 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 KRBOX4Q5JUW0 171 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 RIPPLY2Q5TAB7 128 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 STPG1Q5TH74 334 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PPP1R32Q7Z5V6 425 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 SPICQ8N5J4 248 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 OR11H7Q8NGC8 314 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 LHFPL5Q8TAF8 219 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 HAS2Q92819 552 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 FBXW5Q969U6 566 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 IMMP1LQ96LU5 166 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 LINC00052Q96N35 136 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PTDSS2Q9BVG9 487 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 MRPL22Q9NWU5 206 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms