RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
CKS1B-202ENST00000368436 TGFBR2P37173 567 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 UBE2E1P51965 193 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 GYS2P54840 703 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 CAV3P56539 151 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 PSMA6P60900 246 aaKnown RBP13.11□□□□□ -0.31
CKS1B-202ENST00000368436 GMFBP60983 142 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 ACSM1Q08AH1 577 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 KLRD1Q13241 179 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 GINS1Q14691 196 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
CKS1B-202ENST00000368436 OR8B12Q8NGG6 310 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 NIPAL2Q9H841 368 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 KLHDC2Q9Y2U9 406 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 ZNF816-ZNF321PA0A0X1KG74 233 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 A0A1W2PRD5 423 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 A0A1W2PRF3 423 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 A0A1W2PRM7 423 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 PRODHO43272 600 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 TFF1P04155 84 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 SAA4P35542 130 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 NCR3LG1Q68D85 454 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 TMEM179BQ7Z7N9 219 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 ZDHHC23Q8IYP9 409 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 PNKDQ8N490 385 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 UBE2FQ969M7 185 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 ITFG2Q969R8 447 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 ASB9Q96DX5 294 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 CHID1Q9BWS9 393 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 NLKQ9UBE8 527 aa13.1□□□□□ -0.31
CKS1B-202ENST00000368436 MEIOCA2RUB1 952 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 ACOD1A6NK06 481 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 OR2AT4A6NND4 320 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 RHBDL1O75783 438 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 TSPAN15O95858 294 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 CST1P01037 141 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 HMGN1P05114 100 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 ALOX5APP20292 161 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 SLC2A5P22732 501 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 POU1F1P28069 291 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 PRKDCP78527 4128 aaKnown RBP13.09□□□□□ -0.31
CKS1B-202ENST00000368436 CDK5Q00535 292 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 SLC35D3Q5M8T2 416 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 HCP5Q6MZN7 132 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 CPOQ8IVL8 374 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 ADGRG5Q8IZF4 528 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 PAPD5Q8NDF8 572 aaKnown RBP13.09□□□□□ -0.31
CKS1B-202ENST00000368436 DUS3LQ96G46 650 aaKnown RBP13.09□□□□□ -0.31
CKS1B-202ENST00000368436 HIST1H2AAQ96QV6 131 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 OR51I2Q9H344 312 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 METTL8Q9H825 291 aaKnown RBP13.09□□□□□ -0.31
CKS1B-202ENST00000368436 ZNF222Q9UK12 451 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 LRP12Q9Y561 859 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 MAB21L2Q9Y586 359 aa13.09□□□□□ -0.31
CKS1B-202ENST00000368436 TET2Q6N021 2002 aaPredicted RBP13.08□□□□□ -0.31
CKS1B-202ENST00000368436 IGKV1D-17A0A075B6S4 117 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 A0A0G2JK05 382 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 A0A0U1RQV5 110 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 A0A1W2PQ09 198 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 PAHP00439 452 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 PSG2P11465 335 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 OSMP13725 252 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 NDUFB7P17568 137 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 GLRA1P23415 457 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 MAP2K3P46734 347 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 GPM6AP51674 278 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 GNG3P63215 75 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 CEACAM21Q3KPI0 293 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 SLC35E4Q6ICL7 350 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 DEGS2Q6QHC5 323 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 BEND2Q8NDZ0 799 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 LRGUKQ96M69 825 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 FBLN5Q9UBX5 448 aa13.08□□□□□ -0.32
CKS1B-202ENST00000368436 TRBV23-1A0A0A0MS06 115 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 ZNF732B4DXR9 585 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 IGLV3-1P01715 115 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 T-ENOLP0DO92 83 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 ATP6V1B1P15313 513 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 CALB2P22676 271 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 GABRA2P47869 451 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 HCCSP53701 268 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 EGR3Q06889 387 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 BLMHQ13867 455 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 TRPM8Q7Z2W7 1104 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 KRT77Q7Z794 578 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 BBS1Q8NFJ9 593 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 OR5A2Q8NGI9 324 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 SDSLQ96GA7 329 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 AJUBAQ96IF1 538 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 YIPF3Q9GZM5 350 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 FAM206AQ9NX38 181 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 TAS2R1Q9NYW7 299 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 LAMP5Q9UJQ1 280 aa13.07□□□□□ -0.32
CKS1B-202ENST00000368436 SF3B6Q9Y3B4 125 aaKnown RBP13.07□□□□□ -0.32
CKS1B-202ENST00000368436 OR5B21A6NL26 309 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms