RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 THBS4P35443 961 aa15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 RAC1P63000 192 aa15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 SPERTQ8NA61 448 aa15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 HDHD3Q9BSH5 251 aaPredicted RBP15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 FOXD3Q9UJU5 478 aaPredicted RBP15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 V9GYS6 101 aa15.84■□□□□ 0.13
UBQLN4-201ENST00000368309 CBR3O75828 277 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 SFT2D2O95562 160 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 CNR1P21554 472 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 TAGLNQ01995 201 aaKnown RBP15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 PAN3Q58A45 887 aaKnown RBP15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 TMEM185AQ8NFB2 350 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 ARPC5LQ9BPX5 153 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 CHST5Q9GZS9 411 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 FLVCR1Q9Y5Y0 555 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 TMEM225BP0DP42 221 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 PRKACBP22694 351 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 ACKR3P25106 362 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 MLF1P58340 268 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 ACTBL2Q562R1 376 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 NARS2Q96I59 477 aaKnown RBP15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 CDC6Q99741 560 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 METTL8Q9H825 291 aaKnown RBP15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 CRLF2Q9HC73 371 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 SH2D2AQ9NP31 389 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 SLC39A1Q9NY26 324 aa15.83■□□□□ 0.12
UBQLN4-201ENST00000368309 ZNF84P51523 738 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 EIF4E3Q8N5X7 224 aaKnown RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 OR5AP2Q8NGF4 316 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 HAS2Q92819 552 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 ZNF581Q9P0T4 197 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 A0A0B4J2A0 478 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 NTN3O00634 580 aaPredicted RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 CYC1P08574 325 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 MTCP1P56278 107 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 ZFP36L1Q07352 338 aaKnown RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 FAM189A2Q15884 450 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 CHRFAM7AQ494W8 412 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 ZNF774Q6NX45 483 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 OR14L1PQ8NHC6 308 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 PP6455Q8WZ26 134 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 SMOC1Q9H4F8 434 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 GSKIPQ9P0R6 139 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 SHPKQ9UHJ6 478 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 MCTS1Q9ULC4 181 aaKnown RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 AHCTF1Q8WYP5 2266 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 FAM230AA0A1W2PPH8 454 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 OTX1P32242 354 aaPredicted RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 OTX2P32243 289 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 FOLR3P41439 243 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 PPIAP62937 165 aaKnown RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 TMEM17Q86X19 198 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 ZSCAN4Q8NAM6 433 aaPredicted RBP15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 SPTSSAQ969W0 71 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 OR10C1Q96KK4 312 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 PLEKHJ1Q9NW61 149 aa15.82■□□□□ 0.12
UBQLN4-201ENST00000368309 CCDC187A0A096LP49 1063 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 FOXI3A8MTJ6 420 aaPredicted RBP15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 SPRY1O43609 319 aaPredicted RBP15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 HOXB5P09067 269 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 RFPL3SP0C7P2 107 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 FPR2P25090 351 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 LHFPL1Q86WI0 220 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 ALKBH3Q96Q83 286 aaPredicted RBP15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 ACKR4Q9NPB9 350 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 OSGIN2Q9Y236 505 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 MTRF1O75570 445 aaKnown RBP15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 CBX5P45973 191 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 HIST1H3AP68431 136 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 MC2RQ01718 297 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 HGFACQ04756 655 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 CCDC157Q569K6 752 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 HIST2H3PS2Q5TEC6 136 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 HIST2H3AQ71DI3 136 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 C20orf196Q8IYI0 205 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 CDX2Q99626 313 aaPredicted RBP15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 NMES1Q9C002 83 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 GHRLQ9UBU3 117 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 PCDHGA1Q9Y5H4 931 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 MSGN1A6NI15 193 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 SGCEO43556 437 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 ZNF205O95201 554 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 B4GALT1P15291 398 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 AKR1C2P52895 323 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 DEFA5Q01523 94 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 AKR1C1Q04828 323 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 TRIM61Q5EBN2 209 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 FAM27BQ5VT28 67 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 FOXL2NBQ6ZUU3 175 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 BPIFCQ8NFQ6 507 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 AKR7LQ8NHP1 331 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 NECAB3Q96P71 396 aaPredicted RBP15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 OR5AC2Q9NZP5 309 aa15.81■□□□□ 0.12
UBQLN4-201ENST00000368309 TMEM265A0A087WTH1 108 aa15.8■□□□□ 0.12
UBQLN4-201ENST00000368309 A0A1B0GW55 424 aa15.8■□□□□ 0.12
UBQLN4-201ENST00000368309 DHRS7CA6NNS2 312 aa15.8■□□□□ 0.12
UBQLN4-201ENST00000368309 CEACAM18A8MTB9 384 aa15.8■□□□□ 0.12
UBQLN4-201ENST00000368309 TRAPPC6AO75865 159 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms