RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 CD300LBA8K4G0 201 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 EFSO43281 561 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 HLA-HP01893 362 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ITGB2P05107 769 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 CPN1P15169 458 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 VHLLQ6RSH7 139 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 SEZ6L2Q6UXD5 910 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 KCNRGQ8N5I3 272 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF519Q8TB69 540 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 SH3BGRL2Q9UJC5 107 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 PI4KAP42356 2102 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 IGKV3D-11A0A0A0MRZ8 115 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 IGKV1D-43A0A0B4J1Z2 117 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 AQP7P3A6NL99 342 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 LEUTXA8MZ59 168 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 J3QRE1 110 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 FAM157BP0CG42 384 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 RAC2P15153 192 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 GCH1P30793 250 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ARF1P84077 181 aaKnown RBP7.48□□□□□ -1.21
PTPRK-206ENST00000368215 CLN3Q13286 438 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 AADACL3Q5VUY0 350 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 APCDD1LQ8NCL9 501 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 OR6K3Q8NGY3 331 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 FAM213BQ8TBF2 198 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 DNASE2BQ8WZ79 361 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 CXorf58Q96LI9 332 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF75AQ96N20 296 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 OCSTAMPQ9BR26 566 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 TAF9BQ9HBM6 251 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 KLK13Q9UKR3 277 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 TRBV5-7A0A0A0MS05 114 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 OR6C6A6NF89 314 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 NXPH2O95156 264 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 IGLV3-19P01714 112 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF14P17017 642 aaPredicted RBP7.48□□□□□ -1.21
PTPRK-206ENST00000368215 SELENOVP59797 346 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 RSPO4Q2I0M5 234 aaPredicted RBP7.48□□□□□ -1.21
PTPRK-206ENST00000368215 LGI3Q8N145 548 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 SVBPQ8N300 66 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ARRDC1Q8N5I2 433 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 ZBTB44Q8NCP5 570 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 TMEM104Q8NE00 496 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 UBALD1Q8TB05 177 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 RTN4IP1Q8WWV3 396 aaPredicted RBP7.48□□□□□ -1.21
PTPRK-206ENST00000368215 INTS12Q96CB8 462 aaKnown RBP7.48□□□□□ -1.21
PTPRK-206ENST00000368215 SULT4A1Q9BR01 284 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 PBDC1Q9BVG4 233 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 KCNJ16Q9NPI9 418 aa7.48□□□□□ -1.21
PTPRK-206ENST00000368215 H3BUI4 141 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 IGF2P01344 180 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 IL2RGP31785 369 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 RRADP55042 308 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 ROM1Q03395 351 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 TRA2AQ13595 282 aaKnown RBP eCLIP7.47□□□□□ -1.215e-6■■■■□ 22.5
PTPRK-206ENST00000368215 SLC10A1Q14973 349 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 OR1C1Q15619 314 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 PMS2CLQ68D20 193 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 LHFPL2Q6ZUX7 228 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 NAA40Q86UY6 237 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 BAP18Q8IXM2 172 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 OSR2Q8N2R0 312 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF709Q8N972 641 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 OR13C8Q8NGS7 320 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 MS4A3Q96HJ5 214 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 MFRPQ9BY79 579 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 NARFLQ9H6Q4 476 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 TCFL5Q9UL49 500 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
PTPRK-206ENST00000368215 TANC1Q9C0D5 1861 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 A0A0J9YW62 118 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 A0A1W2PR80 420 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 SERPINE3A8MV23 424 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 KCNAB3O43448 404 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 RAMP1O60894 148 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 LRP3O75074 770 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 MST1P26927 711 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 PABPC1L2AQ5JQF8 200 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 CT55Q8WUE5 264 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 NPAS1Q99742 590 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 ZFP64Q9NPA5 681 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 R4GN57 208 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 HEATR5AQ86XA9 2040 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 BCL2L11O43521 198 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 CFDP00746 253 aaPredicted RBP7.47□□□□□ -1.21
PTPRK-206ENST00000368215 GPM6AP51674 278 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 STARD6P59095 220 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 C19orf57Q0VDD7 668 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 RAB35Q15286 201 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 C3AR1Q16581 482 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 PNLIPRP3Q17RR3 467 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 DRAM2Q6UX65 266 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 WDR5BQ86VZ2 330 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 ZDHHC22Q8N966 263 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 LRRC75AQ8NAA5 344 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 ADAD2Q8NCV1 583 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms