RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SHARPINQ9H0F6 387 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 FKBP11Q9NYL4 201 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 B4GALT3O60512 393 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 EPPINO95925 133 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 PTGFRP43088 359 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 SLC25A26Q70HW3 274 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 M1APQ8TC57 530 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 RAB27BO00194 218 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 ANKRD34AQ69YU3 496 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 NPEPL1Q8NDH3 523 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 CCL4L1Q8NHW4 92 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 KTI12Q96EK9 354 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 RHNO1Q9BSD3 238 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 MED29Q9NX70 200 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 OGG1O15527 345 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 CRYABP02511 175 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 AANATQ16613 207 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 TVP23CQ96ET8 276 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 COMMD5Q9GZQ3 224 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 SLC22A20A6NK97 555 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 LGALS4P56470 323 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 DMKNQ6E0U4 476 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 ASTLQ6HA08 431 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 GLRX2Q9NS18 164 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 MED9Q9NWA0 146 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 PDGFBP01127 241 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 SEMG1P04279 462 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 FOXF1Q12946 379 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 EIF4EBP2Q13542 120 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 CCDC74BQ96LY2 380 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 WNT16Q9UBV4 365 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 THADAQ6YHU6 1953 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 CTSVO60911 334 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 WDR1O75083 606 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF787Q6DD87 383 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 LANCL2Q9NS86 450 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 GNG13Q9P2W3 67 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 LOXL2Q9Y4K0 774 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 CACNA1BQ00975 2339 aa10.79□□□□□ -0.68
CDC42BPA-203ENST00000366766 HS3ST1O14792 307 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF117Q03924 483 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 HPSE2Q8WWQ2 592 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 UFSP2Q9NUQ7 469 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 PLEKHB1Q9UF11 243 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 CCDC187A0A096LP49 1063 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 HAAOP46952 286 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 DMWDQ09019 674 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 TMEM18Q96B42 140 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 VSTM2LQ96N03 204 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 SF3B5Q9BWJ5 86 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 NMES1Q9C002 83 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 DUSP13Q9UII6 198 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 A0A0G2JMZ2 1700 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 LRRC37A2A6NM11 1700 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 DBX2Q6ZNG2 339 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 YRDCQ86U90 279 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 DVL1P1P54792 670 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 LURAP1Q96LR2 239 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 PRICKLE3O43900 615 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 TNFRSF1AP19438 455 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 SDHBP21912 280 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR2B8PP59922 312 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 IL13RA2Q14627 380 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 KISS1Q15726 138 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 HSD17B13Q7Z5P4 300 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 C5orf67F2Z3F1 127 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 WDR38Q5JTN6 314 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 G3V3Y1 287 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 FAM27D1Q5T7N8 215 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 EID2BQ96D98 161 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 KIAA1456Q9P272 454 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 RAB7AP51149 207 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 PPIAP62937 165 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 C1orf174Q8IYL3 243 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR4F5Q8NH21 305 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR4F4Q96R69 305 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 TAAR9Q96RI9 348 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 C20orf141Q9NUB4 165 aa10.78□□□□□ -0.68
CDC42BPA-203ENST00000366766 GLRA1P23415 457 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 TIAL1Q01085 375 aaKnown RBP eCLIP10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 OR10X1Q8NGY0 326 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 PTHLHP12272 177 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 TESK1Q15569 626 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 LINC00596Q86U02 117 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF775Q96BV0 537 aaPredicted RBP10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 HRASP01112 189 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 PNRC1Q12796 327 aaPredicted RBP10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF345Q14585 488 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 NHLRC1Q6VVB1 395 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 VN1R4Q7Z5H5 301 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 STPG2Q8N412 459 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 ZNF251Q9BRH9 671 aa10.77□□□□□ -0.68
CDC42BPA-203ENST00000366766 SNRPNP63162 240 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 MAMSTRQ6ZN01 415 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms