RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ATG4DQ86TL0 474 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 A0A1B0GTQ1 180 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 COX5AP20674 150 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ARG2P78540 354 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF321PQ8N8H1 164 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 LHX4Q969G2 390 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 TXN2Q99757 166 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 SOX15O60248 233 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 MEOX2P50222 304 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 GUK1Q16774 197 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 NKAIN2Q5VXU1 208 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 RLN3Q8WXF3 142 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 C11orf40Q8WZ69 217 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM18Q96B42 140 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 CCDC163A0A0D9SF12 145 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR2B8PP59922 312 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 DRAM2Q6UX65 266 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 AMER3Q8N944 861 aa10.57□□□□□ -0.72
CDC42BPA-202ENST00000366764 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 H2BFWTQ7Z2G1 175 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 OSR2Q8N2R0 312 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 SMIM7Q9BQ49 75 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 GNG13Q9P2W3 67 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 ING1Q9UK53 422 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 MIDNQ504T8 468 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 FAM162BQ5T6X4 162 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 MED29Q9NX70 200 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 HAGHQ16775 308 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 GAB2Q9UQC2 676 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 FSTP19883 344 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM196Q5HYL7 178 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 NUBPLQ8TB37 319 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 C2CD4CQ8TF44 421 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 CTLA4P16410 223 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 ACOT6Q3I5F7 207 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 PLPP3O14495 311 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 DRD3P35462 400 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF787Q6DD87 383 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR6S1Q8NH40 331 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 PATE1Q8WXA2 126 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 GABRG3Q99928 467 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 EPPINO95925 133 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 SMAD2Q15796 467 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 A0A0U1RQK1 487 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 AQP7P3A6NL99 342 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 SPP1P10451 314 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 BAGE3Q86Y29 109 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 BAGE2Q86Y30 109 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 CDCP1Q9H5V8 836 aa10.56□□□□□ -0.72
CDC42BPA-202ENST00000366764 KLRC4-KLRK1H3BQV0 150 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 CLN3Q13286 438 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 KISS1Q15726 138 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 DAZAP1Q96EP5 407 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 C20orf24Q9BUV8 137 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 NAA60Q9H7X0 242 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 ST6GALNAC2Q9UJ37 374 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 LRRK1Q38SD2 2015 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 A0A1W2PPV9 198 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 TUSC2O75896 110 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 DMBX1Q8NFW5 382 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 MMP16P51512 607 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR1F12Q8NHA8 337 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 SH2D1BO14796 132 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 PTP4A3O75365 173 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 KCNAB1Q14722 419 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 FRRS1LQ9P0K9 344 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 B4DEV8 164 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZDHHC23Q8IYP9 409 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 GPR173Q9NS66 373 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 OPRM1P35372 400 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 RPS27P42677 84 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 LINC00052Q96N35 136 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 METAP1P53582 386 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 NHLRC1Q6VVB1 395 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR4D9Q8NGE8 314 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR11L1Q8NGX0 322 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR6X1Q8NH79 312 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 DHHO43323 396 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 CTSDP07339 412 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZGLP1P0C6A0 271 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 ACKR3P25106 362 aa10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 HEYLQ9NQ87 328 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-202ENST00000366764 CBR3O75828 277 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 FABP1P07148 127 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 EDARADDQ8WWZ3 215 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ARHGAP5-AS1Q96IT6 56 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF75AQ96N20 296 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 TUBG2Q9NRH3 451 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 FLRT3Q9NZU0 649 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms