RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 NKAIN3Q8N8D7 197 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 Q8NA96 180 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 RNF133Q8WVZ7 376 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 APH1AQ96BI3 265 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 SLAMF6Q96DU3 332 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 LINC00470Q9BZP3 86 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 ITPR1Q14643 2758 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF736B4DX44 427 aaPredicted RBP11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 DISC1C4P0D8 188 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 AMY2AP04746 511 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 CTRB1P17538 263 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 MEF2DQ14814 521 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 RAB12Q6IQ22 244 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 LPCAT3Q6P1A2 487 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 KLHL24Q6TFL4 600 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 RHOUQ7L0Q8 258 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 PPP1R14AQ96A00 147 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 WBP1Q96G27 269 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF416Q9BWM5 594 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 GPR35Q9HC97 309 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 GLRX2Q9NS18 164 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 A0A0D9SG52 128 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF878C9JN71 531 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 RAB6AP20340 208 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 UBE2MP61081 183 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 SORDQ00796 357 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 PMPCAQ10713 525 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 CEACAM16Q2WEN9 425 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 C1orf100Q5SVJ3 147 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 DCAF12L2Q5VW00 463 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 LRRC18Q8N456 261 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 GJC3Q8NFK1 279 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 LHFPL5Q8TAF8 219 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 TRIB1Q96RU8 372 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 AIFM2Q9BRQ8 373 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 KCNK15Q9H427 330 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 OR52A1Q9UKL2 312 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 ATRXP46100 2492 aa11.5□□□□□ -0.57
SQSTM1-201ENST00000360718 AHRRA9YTQ3 701 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF587BE7ETH6 402 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 CD74P04233 296 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 UBCP0CG48 685 aaKnown RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 HSD11B1P28845 292 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 KRTCAP3Q53RY4 240 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 TSPO2Q5TGU0 170 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 FAM27BQ5VT28 67 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 OVCH2Q7RTZ1 564 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 HSD17B13Q7Z5P4 300 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF584Q8IVC4 421 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 OR5M9Q8NGP3 310 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 NABP1Q96AH0 204 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 FOXB1Q99853 325 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 EMC9Q9Y3B6 208 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 DOK2O60496 412 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 IGHV3-9P01782 118 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 FCER2P06734 321 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 HOXD4P09016 255 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 UBBP0CG47 229 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 RPS27AP62979 156 aaKnown RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 UBA52P62987 128 aaKnown RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 CFAP77Q6ZQR2 320 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 ABHD12BQ7Z5M8 362 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 TMED4Q7Z7H5 227 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF546Q86UE3 836 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 BPIFB2Q8N4F0 458 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 CXorf58Q96LI9 332 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 PRRT1Q99946 306 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 COMMD9Q9P000 198 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 CGGBP1Q9UFW8 167 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 RAB22AQ9UL26 194 aa11.49□□□□□ -0.57
SQSTM1-201ENST00000360718 RTTNQ86VV8 2226 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 TMEM269A0A1B0GVZ9 245 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 LOC107986453A0A1B0GWG9 222 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 LOC390937A0A1W2PQ73 354 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 A8MXK9 166 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 SCGNO76038 276 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 FARS2O95363 451 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 MGMTP16455 207 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 SPOCK1Q08629 439 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 ZMYND11Q15326 602 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 STK11Q15831 433 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 EIF4E3Q8N5X7 224 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC7A10Q9NS82 523 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 CLCF1Q9UBD9 225 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 INTS1Q8N201 2190 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms