RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SRYQ05066 204 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 RAB11BQ15907 218 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 SFT2D1Q8WV19 159 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 CNTNAP3BQ96NU0 1288 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 GAL3ST1Q99999 423 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 CNTNAP3Q9BZ76 1288 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 PNRC2Q9NPJ4 139 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 NIT2Q9NQR4 276 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 SLC17A5Q9NRA2 495 aa12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 ZNF275Q9NSD4 429 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-201ENST00000359867 P2RY10O00398 339 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 ZNF84P51523 738 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 EFNB2P52799 333 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 CLDN15P56746 228 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 PHYHD1Q5SRE7 291 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 Q8NA96 180 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 DVL3Q92997 716 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 CPNE4Q96A23 557 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 MRPS24Q96EL2 167 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 TAS2R4Q9NYW5 299 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 FLVCR1Q9Y5Y0 555 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 CXCL13O43927 109 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 NDUFB6O95139 128 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 RAP2BP61225 183 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 PLXDC2Q6UX71 529 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 GJC3Q8NFK1 279 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 GPN1Q9HCN4 374 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 ACKR4Q9NPB9 350 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 SPRR3Q9UBC9 169 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 KCNK7Q9Y2U2 307 aa12.14□□□□□ -0.47
CSNK1E-201ENST00000359867 TRGV5A0A0B4J1U4 118 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 MPTX1A8MV57 137 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 RER1O15258 196 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 LHX2P50458 406 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 LY6DQ14210 128 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 HIST2H3AQ71DI3 136 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 ZFP82Q8N141 532 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 NABP1Q96AH0 204 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 TMEM138Q9NPI0 162 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 LOC100289279A0A1B0GTE1 492 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 TUBAL3A6NHL2 446 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 SYT7O43581 403 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 ITGA5P08648 1049 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 S100A11P31949 105 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 CAPZA1P52907 286 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 OR51D1Q8NGF3 324 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 PFDN2Q9UHV9 154 aa12.13□□□□□ -0.47
CSNK1E-201ENST00000359867 SMG1Q96Q15 3661 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 LOC390937A0A1W2PQ73 354 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 XRCC3O43542 346 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 CYTIPO60759 359 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 RP2O75695 350 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 SPDEFO95238 335 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 HTR3BO95264 441 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 RD3LP0DJH9 198 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 CPN1P15169 458 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 DHODHQ02127 395 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 ENDOGQ14249 297 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 C1orf100Q5SVJ3 147 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 ANKRD16Q6P6B7 361 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 SLC25A28Q96A46 364 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 ZNF845Q96IR2 970 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 RBM24Q9BX46 236 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 CHST6Q9GZX3 395 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 TUBD1Q9UJT1 453 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 OR2A4O95047 310 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 HTR2CP28335 458 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 POU3F4P49335 361 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 CLDN18P56856 261 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 PRR30Q53SZ7 412 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 FAM27BQ5VT28 67 aa12.12□□□□□ -0.47
CSNK1E-201ENST00000359867 MUC20Q8N307 709 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms