RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CCSMST1Q4G0I0 132 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ABHD17BQ5VST6 288 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 RNF165Q6ZSG1 346 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 TXNIPQ9H3M7 391 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OR5K3A6NET4 321 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 WNT11O96014 354 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ABOP16442 354 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OTX2P32243 289 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OR8G1Q15617 311 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 METRNLQ641Q3 311 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PRR27Q6MZM9 219 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF738Q8NE65 137 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PBOV1Q9GZY1 135 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 SLCO1C1Q9NYB5 712 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ABCA7Q8IZY2 2146 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 LCTP09848 1927 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ARPC3O15145 178 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OPN1LWP04000 364 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PVRP15151 417 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 HAAOP46952 286 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 DLK1P80370 383 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF813Q6ZN06 617 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OR52N5Q8NH56 324 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 RAB24Q969Q5 203 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PELI1Q96FA3 418 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 STRCP1A6NGW2 1772 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 MAP1LC3B2A6NCE7 125 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 EIF4E2O60573 245 aaKnown RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 NPY1RP25929 384 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 FAM3BP58499 235 aaPredicted RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 C1orf61Q13536 156 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 TMEM104Q8NE00 496 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OR2A1Q8NGT9 310 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 NUBPLQ8TB37 319 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 SPACA5Q96QH8 159 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 RAB40CQ96S21 281 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 INSM2Q96T92 566 aaPredicted RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 MAP1LC3BQ9GZQ8 125 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 AQP7P3A6NL99 342 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 TBX19O60806 448 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 MBPP02686 304 aaPredicted RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 IL13RA2Q14627 380 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PLA1AQ53H76 456 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 FFAR4Q5NUL3 377 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 LINC00469Q8N7U9 141 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PAM16Q9Y3D7 125 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ADAMTSL1Q8N6G6 1762 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 DBX1A6NMT0 343 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 GPR37O15354 613 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ADH4P08319 380 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ENPP1P22413 925 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 TMEM33P57088 247 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 B2MP61769 119 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 RPS15P62841 145 aaKnown RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 SHHQ15465 462 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 SLC25A43Q8WUT9 341 aaPredicted RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PDFQ9HBH1 243 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PARP11Q9NR21 331 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 C7orf66A4D0T2 115 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 WDR1O75083 606 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 OR2J3O76001 311 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 ETHE1O95571 254 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 NRASP01111 189 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 FOLR3P41439 243 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 DUSP3P51452 185 aaPredicted RBP7.91□□□□□ -1.14
COL6A6-201ENST00000358511 RTL8BQ17RB0 113 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 DHRS11Q6UWP2 260 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 SHISA6Q6ZSJ9 500 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 USP53Q70EK8 1073 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 MSRB3Q8IXL7 192 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 FBXO17Q96EF6 278 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 MS4A3Q96HJ5 214 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PRDM7Q9NQW5 492 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PLA2G10O15496 165 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 OR2J2O76002 312 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 GPR12P47775 334 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 CNN1P51911 297 aaKnown RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 IFITM3Q01628 133 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 LAIR1Q6GTX8 287 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 DTD1Q8TEA8 209 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 BSGP35613 385 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 ERV3-1Q14264 604 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 ASTLQ6HA08 431 aaPredicted RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 TMEFF1Q8IYR6 380 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 OR5AU1Q8NGC0 362 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 MMACHCQ9Y4U1 282 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 EIF3GO75821 320 aaKnown RBP eCLIP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 CRHP06850 196 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 TMPRSS11FQ6ZWK6 438 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 FA2HQ7L5A8 372 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 GMLQ99445 158 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 LOC285556D6RIA3 1793 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 SLC25A1P53007 311 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 LTC4SQ16873 150 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 WDR74Q6RFH5 385 aaPredicted RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 ETFBKMTQ8IXQ9 262 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms