RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCDC163A0A0D9SF12 145 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 SPTY2D1-AS1A0A0U1RR47 76 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF727A8MUV8 499 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 UMAD1C9J7I0 102 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 UBE2CO00762 179 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 RAMP1O60894 148 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 HPNP05981 417 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 SMIM6P0DI80 62 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 MPZP25189 248 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 CHAF1BQ13112 559 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 GUK1Q16774 197 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 DEFB133Q30KQ1 61 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 TMEM268Q5VZI3 342 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 ARRDC1Q8N5I2 433 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 C15orf54Q8N8G6 183 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF2Q9BSG1 426 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-203ENST00000356147 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTPRA-203ENST00000356147 B3GALT5Q9Y2C3 310 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 URGCP-MRPS24S4R325 110 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 NCOA6Q14686 2063 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-203ENST00000356147 GPR37O15354 613 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 RAB5AP20339 215 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 PPP1CCP36873 323 aaKnown RBP8.93□□□□□ -0.98
PTPRA-203ENST00000356147 CAMLGP49069 296 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 FOXF1Q12946 379 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 PDCD1Q15116 288 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 GGNBP1Q5YKI7 109 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 DNM1P34Q6PK57 102 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 H1FNTQ75WM6 255 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF283Q8N7M2 679 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 LMX1AQ8TE12 382 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 SGK3Q96BR1 496 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 RARRES2Q99969 163 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 OR10A2Q9H208 303 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 OSGIN2Q9Y236 505 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 TIMM10BQ9Y5J6 103 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 FRYQ5TBA9 3013 aa8.93□□□□□ -0.98
PTPRA-203ENST00000356147 F5H5K5 113 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 CST4P01036 141 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 RABIFP47224 123 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 CAPZBP47756 277 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 SULT1A1P50225 295 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 YPEL5P62699 121 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 NHLH2Q02577 135 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 VAX1Q5SQQ9 334 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 EIF5AL1Q6IS14 154 aaKnown RBP8.92□□□□□ -0.98
PTPRA-203ENST00000356147 C5orf46Q6UWT4 87 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 Q7L0L9 218 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 KCNG3Q8TAE7 436 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 FNDC9Q8TBE3 224 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 SLAMF9Q96A28 289 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 ABHD14AQ9BUJ0 271 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 RNF122Q9H9V4 155 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 MCTS1Q9ULC4 181 aaKnown RBP8.92□□□□□ -0.98
PTPRA-203ENST00000356147 SRPK3Q9UPE1 567 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 NUDT19A8MXV4 375 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF814B7Z6K7 855 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 ANGPTL7O43827 346 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 MT-ND4LP03901 98 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 CHRM2P08172 466 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 LAP3P28838 519 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 SFTPDP35247 375 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 GABRA4P48169 554 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 DLX2Q07687 328 aaPredicted RBP8.92□□□□□ -0.98
PTPRA-203ENST00000356147 C14orf28Q4W4Y0 310 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF561Q8N587 486 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF565Q8N9K5 539 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF285Q96NJ3 590 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 PRRX2Q99811 253 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 LIME1Q9H400 295 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 COPS7AQ9UBW8 275 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 C14orf166Q9Y224 244 aaKnown RBP8.92□□□□□ -0.98
PTPRA-203ENST00000356147 B3GALT1Q9Y5Z6 326 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 PIAS3Q9Y6X2 628 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 CPAMD8Q8IZJ3 1885 aa8.92□□□□□ -0.98
PTPRA-203ENST00000356147 EFNA2O43921 213 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 IFNA2P01563 188 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 GSTP1P09211 210 aaKnown RBP8.91□□□□□ -0.98
PTPRA-203ENST00000356147 FAHP16930 419 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 AGAP20933 346 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 IL15RAQ13261 267 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 ZNF343Q6P1L6 599 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 PLXDC2Q6UX71 529 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 LHFPL1Q86WI0 220 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 TMEM156Q8N614 296 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 OR2AJ1Q8NGZ0 328 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 MRPL38Q96DV4 380 aaKnown RBP8.91□□□□□ -0.98
PTPRA-203ENST00000356147 TPSD1Q9BZJ3 242 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 SERINC1Q9NRX5 453 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 NXT1Q9UKK6 140 aaKnown RBP8.91□□□□□ -0.98
PTPRA-203ENST00000356147 KPTNQ9Y664 436 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 RALGAPA1Q6GYQ0 2036 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 C5orf67F2Z3F1 127 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 MASP2O00187 686 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 NXPH3O95157 252 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 S100A8P05109 93 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 PET100P0DJ07 73 aa8.91□□□□□ -0.98
PTPRA-203ENST00000356147 LYL1P12980 280 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms