RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 LYPD6Q86Y78 171 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 NKAIN3Q8N8D7 197 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 OR51T1Q8NGJ9 327 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 ST8SIA2Q92186 375 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 INTS12Q96CB8 462 aaKnown RBP15.33■□□□□ 0.04
NPAS3-202ENST00000356141 WDYHV1Q96HA8 205 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 IP6K3Q96PC2 410 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 TIMM10BQ9Y5J6 103 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 CADP27708 2225 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 FAM221AA4D161 298 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 SLC22A20A6NK97 555 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 RAD51DO75771 328 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 FARS2O95363 451 aaKnown RBP15.33■□□□□ 0.04
NPAS3-202ENST00000356141 PMP2P02689 132 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 EDN3P14138 238 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 RAC2P15153 192 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 MTCP1P56278 107 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 C1orf100Q5SVJ3 147 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 STEAP1BQ6NZ63 245 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 HAS2Q92819 552 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 ARHGAP5-AS1Q96IT6 56 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 MOB1AQ9H8S9 216 aa15.33■□□□□ 0.04
NPAS3-202ENST00000356141 SCRN3Q0VDG4 424 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 PLAC9Q5JTB6 97 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 LINC00518Q8N0U6 118 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 GABRG1Q8N1C3 465 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 TMEM178AQ8NBL3 297 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 LHFPL5Q8TAF8 219 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 HDHD3Q9BSH5 251 aaPredicted RBP15.32■□□□□ 0.04
NPAS3-202ENST00000356141 TMEM59Q9BXS4 323 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 TPRP12270 2363 aaKnown RBP15.32■□□□□ 0.04
NPAS3-202ENST00000356141 TLN1Q9Y490 2541 aaKnown RBP15.32■□□□□ 0.04
NPAS3-202ENST00000356141 YES1P07947 543 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 CRYGSP22914 178 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 RAB1AP62820 205 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 SEMA6DQ8NFY4 1073 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 THRSPQ92748 146 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 ST6GALNAC5Q9BVH7 336 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 COL12A1Q99715 3063 aa15.32■□□□□ 0.04
NPAS3-202ENST00000356141 INTS1Q8N201 2190 aaKnown RBP15.32■□□□□ 0.04
NPAS3-202ENST00000356141 IGKV1-27A0A075B6S5 117 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 METTL21EPA6NDL7 271 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 LEUTXA8MZ59 168 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 LDLRAD4O15165 306 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 RAB3DO95716 219 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 PDGFAP04085 211 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 CELA3BP08861 270 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 CST2P09228 141 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 STOMP27105 288 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 LIN54Q6MZP7 749 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 NOXA1Q86UR1 476 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 GALNT11Q8NCW6 608 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 S100A13Q99584 98 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 CA10Q9NS85 328 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 ING3Q9NXR8 418 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 DNPH1O43598 174 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 CDC14BO60729 498 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 HTR3BO95264 441 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 CYB5AP00167 134 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 VSIG10L2P0DP72 767 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 AP3S2P59780 193 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 DYRK1AQ13627 763 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 CRIP3Q6Q6R5 217 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 MOB3CQ70IA8 216 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 MYPOPQ86VE0 399 aaPredicted RBP15.31■□□□□ 0.04
NPAS3-202ENST00000356141 LPAR5Q9H1C0 372 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 B3GNT2Q9NY97 397 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 KCNK7Q9Y2U2 307 aa15.31■□□□□ 0.04
NPAS3-202ENST00000356141 I3L521 148 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 ECDO95905 644 aaPredicted RBP15.3■□□□□ 0.04
NPAS3-202ENST00000356141 PI3P19957 117 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 FAM209BQ5JX69 171 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF585AQ6P3V2 769 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 FOXL2NBQ6ZUU3 175 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 SCMH1Q96GD3 660 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 MRI1Q9BV20 369 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 POFUT1Q9H488 388 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 PTTG3PQ9NZH4 202 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 GPR160Q9UJ42 338 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 RAB22AQ9UL26 194 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 LOC390937A0A1W2PQ73 354 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 A6NJY4 79 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 GABRA1P14867 456 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 PTGFRP43088 359 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 HIST1H3AP68431 136 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 ARFRP1Q13795 201 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 TAF9Q16594 264 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 C2orf68Q2NKX9 166 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 HIST2H3PS2Q5TEC6 136 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 HIST2H3AQ71DI3 136 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF584Q8IVC4 421 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 FAM219AQ8IW50 185 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 GPX8Q8TED1 209 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 C1orf147Q96MC9 270 aaPredicted RBP15.3■□□□□ 0.04
NPAS3-202ENST00000356141 CMTM3Q96MX0 182 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 EMC3Q9P0I2 261 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF850A8MQ14 1090 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 SDCBPO00560 298 aaPredicted RBP15.3■□□□□ 0.04
NPAS3-202ENST00000356141 MMP7P09237 267 aaPredicted RBP15.3■□□□□ 0.04
NPAS3-202ENST00000356141 SSTR2P30874 369 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms