RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 DNAJB12Q9NXW2 375 aaKnown RBP16.13■□□□□ 0.17
COL18A1-202ENST00000355480 GOLT1BQ9Y3E0 138 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 PTPRZ1P23471 2315 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SNRPGP15A8MWD9 76 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 DEFB108AA8MXU0 73 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SMIM17P0DL12 118 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SULT1A3P0DMM9 295 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SULT1A4P0DMN0 295 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 PDZD11Q5EBL8 140 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 PWWP2BQ6NUJ5 590 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 TMPRSS11FQ6ZWK6 438 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 RHNO1Q9BSD3 238 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 BMI1P35226 326 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 SSBP1Q04837 148 aaKnown RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 JMJD6Q6NYC1 403 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 C16orf47Q6ZP98 133 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 ZNF485Q8NCK3 441 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 FAM103A1Q9BTL3 118 aaKnown RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 SLC25A32Q9H2D1 315 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 ADGRL4Q9HBW9 690 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 TAAR3PQ9P1P4 343 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 UBE2L5PA0A1B0GUS4 154 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 EPPINO95925 133 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 ZNF32P17041 273 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 SLC25A1P53007 311 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM229BQ8NBD8 167 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 OR5M8Q8NGP6 311 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 YIPF6Q96EC8 236 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 MEX3AA1L020 520 aaKnown RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 GPANK1O95872 356 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 FBP1P09467 338 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 CEACAM6P40199 344 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 LYG1Q8N1E2 194 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 MCHR2Q969V1 340 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 KNL1Q8NG31 2342 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 DDX60LQ5H9U9 1706 aaKnown RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 TAF1P21675 1872 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 MYO7AQ13402 2215 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 OR52B4Q8NGK2 314 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM56Q96MV1 263 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 SLC6A13Q9NSD5 602 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 IL20Q9NYY1 176 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 HOXC4P09017 264 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 S100A4P26447 101 aaKnown RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 TNFAIP6P98066 277 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-202ENST00000355480 PLA1AQ53H76 456 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 CMBLQ96DG6 245 aa16.12■□□□□ 0.17
COL18A1-202ENST00000355480 SH2D5Q6ZV89 423 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 SERTM1A2A2V5 107 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 TMIGD3P0DMS9 266 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-202ENST00000355480 CLDN20P56880 219 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 SLC26A1Q9H2B4 701 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 C20orf141Q9NUB4 165 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 M0R296 226 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 CD37P11049 281 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 CNN1P51911 297 aaKnown RBP16.11■□□□□ 0.17
COL18A1-202ENST00000355480 KISS1Q15726 138 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 WDR38Q5JTN6 314 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 BAP18Q8IXM2 172 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 RFESDQ8TAC1 157 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 CT55Q8WUE5 264 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 CDX2Q99626 313 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-202ENST00000355480 LHX9Q9NQ69 397 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 LAMA4Q16363 1823 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 KLF3P57682 345 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-202ENST00000355480 PPP1R1CQ8WVI7 109 aa16.11■□□□□ 0.17
COL18A1-202ENST00000355480 GAR1Q9NY12 217 aaKnown RBP16.11■□□□□ 0.17
COL18A1-202ENST00000355480 CALHM3Q86XJ0 350 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 C20orf196Q8IYI0 205 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 HGDQ93099 445 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 DHRS3O75911 302 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 SRD5A2P31213 254 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 PPP1CAP62136 330 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 C12orf73Q69YU5 71 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 Q7L0L9 218 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 GLCCI1Q86VQ1 547 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 RELL2Q8NC24 303 aaPredicted RBP16.1■□□□□ 0.17
COL18A1-202ENST00000355480 MISP3Q96FF7 219 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 LRRC3CA6NJW4 275 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 G3V3Q6 166 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 FAM109BQ6ICB4 259 aaPredicted RBP16.1■□□□□ 0.17
COL18A1-202ENST00000355480 LRRC29Q8WV35 223 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 SMIM4Q8WVI0 70 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 GABRG3Q99928 467 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 MAP1BP46821 2468 aaKnown RBP16.1■□□□□ 0.17
COL18A1-202ENST00000355480 LIMS3P0CW19 117 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 LIMS4P0CW20 117 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 CCL2P13500 99 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 COX7A1P24310 79 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 GALNSP34059 522 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 NKG7Q16617 165 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM128Q5BJH2 165 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 CARFQ8N187 725 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 TM4SF19Q96DZ7 209 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 FCGR3BO75015 233 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 OR2J3O76001 311 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 CST7O76096 145 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 HRASP01112 189 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 ZNF17P17021 662 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 SOX8P57073 446 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms