RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ZNF283Q8N7M2 679 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 DTX3Q8N9I9 347 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 ZFP62Q8NB50 900 aaPredicted RBP7.12□□□□□ -1.27
CD44-205ENST00000352818 NAXEQ8NCW5 288 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 OR51A2Q8NGJ7 313 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 OR51E1Q8TCB6 317 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 FGGYQ96C11 551 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 ADAT3Q96EY9 351 aaPredicted RBP7.12□□□□□ -1.27
CD44-205ENST00000352818 C1orf159Q96HA4 380 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CCL19Q99731 98 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CACNG6Q9BXT2 260 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 SCPEP1Q9HB40 452 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 HRASLSQ9HDD0 168 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 TMEM38BQ9NVV0 291 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 ZNF391Q9UJN7 358 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 MRPS7Q9Y2R9 242 aaKnown RBP7.12□□□□□ -1.27
CD44-205ENST00000352818 OR6C6A6NF89 314 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ZNF724A8MTY0 619 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 KLRC4-KLRK1H3BQV0 150 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 H7C417 338 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 LMX1BO60663 402 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 PRAF2O60831 178 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 GOSR1O95249 250 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ACTL6AO96019 429 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 TMIGD3P0DMS9 266 aaPredicted RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 ZNF20P17024 532 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 THBS4P35443 961 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 FAUP35544 74 aaKnown RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 SRP9P49458 86 aaKnown RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 GSK3AP49840 483 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ASCL1P50553 236 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 MECP2P51608 486 aaKnown RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 PRKXP51817 358 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 EFNB2P52799 333 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ACTBP60709 375 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 PCBD1P61457 104 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ACTG1P63261 375 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 SPOCK1Q08629 439 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 SCRN3Q0VDG4 424 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 PLA2G7Q13093 441 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 CBX3Q13185 183 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 CARTPTQ16568 116 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 GLYATL3Q5SZD4 288 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 DRAM2Q6UX65 266 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 C12orf54Q6X4T0 127 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 UTS2BQ765I0 119 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ZNF627Q7L945 461 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 OR2W3Q7Z3T1 314 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ABHD12BQ7Z5M8 362 aaPredicted RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 LUZP2Q86TE4 346 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 GLCCI1Q86VQ1 547 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 MEIOBQ8N635 442 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 TMEM251Q8N6I4 163 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 OR56B4Q8NH76 319 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 GPX8Q8TED1 209 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 AKAP1Q92667 903 aaKnown RBP eCLIP7.11□□□□□ -1.27
CD44-205ENST00000352818 SPTSSAQ969W0 71 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 PHF21AQ96BD5 680 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 RBM24Q9BX46 236 aaKnown RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 REG4Q9BYZ8 158 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 SLCO5A1Q9H2Y9 848 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 GHITMQ9H3K2 345 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 BCO1Q9HAY6 547 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ACKR4Q9NPB9 350 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 ZNF701Q9NV72 531 aaPredicted RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 MTFP1Q9UDX5 166 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 CGGBP1Q9UFW8 167 aaPredicted RBP7.11□□□□□ -1.27
CD44-205ENST00000352818 RAB22AQ9UL26 194 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 V9GYS6 101 aa7.11□□□□□ -1.27
CD44-205ENST00000352818 TMEM14DPA8MWL7 114 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 H3BSH0 61 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 RPL36A-HNRNPH2H7BZ11 118 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 M0R135 149 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 SYNGR3O43761 229 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 RBBP9O75884 186 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 DHRS3O75911 302 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 SYNGR4O95473 234 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 MT-ND4P03905 459 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 LPLP06858 475 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 H2AFB2P0C5Z0 115 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 UBBP0CG47 229 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 GIFP27352 417 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 PRSS3P35030 304 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 GNALP38405 381 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ALDH3B1P43353 468 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 STARP49675 285 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 QRFPP83859 136 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 PLGLB1Q02325 96 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 FAM189A2Q15884 450 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ZFP69Q49AA0 526 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 MIDNQ504T8 468 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 RNASE12Q5GAN4 147 aaKnown RBP7.1□□□□□ -1.27
CD44-205ENST00000352818 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 CD276Q5ZPR3 534 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 ZNF585AQ6P3V2 769 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 FAM57BQ71RH2 274 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 OR5AS1Q8N127 324 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 JAGN1Q8N5M9 183 aa7.1□□□□□ -1.27
CD44-205ENST00000352818 OR52N4Q8NGI2 321 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms