RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MRPL14Q6P1L8 145 aaKnown RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 GCDHQ92947 438 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 EMG1Q92979 244 aaKnown RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 BARHL1Q9BZE3 327 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 AMDHD2Q9Y303 409 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 LOC102723996A0A087X1L8 192 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF728P0DKX0 622 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 NFYAP23511 347 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 MMP16P51512 607 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 RAG2P55895 527 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 CLDN6P56747 220 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 CLDN20P56880 219 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 RAB1AP62820 205 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 FJX1Q86VR8 437 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 GABRG1Q8N1C3 465 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SLC38A9Q8NBW4 561 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SLC26A10Q8NG04 563 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 DTD1Q8TEA8 209 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 HAS2Q92819 552 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 MARC2Q969Z3 335 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 TRAPPC2LQ9UL33 140 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 A0A0D9SG52 128 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 LNP1A1A4G5 178 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SIX6O95475 246 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF25P17030 456 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 RFC3P40938 356 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 RAB7AP51149 207 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 HYAL4Q2M3T9 481 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 OR5D18Q8NGL1 313 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SNRPGP15A8MWD9 76 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 DEGS1O15121 323 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 ZFP36L1Q07352 338 aaKnown RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 C1orf174Q8IYL3 243 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SCARB1Q8WTV0 552 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 TAS2R5Q9NYW4 299 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 PUS1Q9Y606 427 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 HTD2P86397 168 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 AANATQ16613 207 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SLC25A35Q3KQZ1 300 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 KCNIP4Q6PIL6 250 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 METTL17Q9H7H0 456 aaPredicted RBP10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SH2D1BO14796 132 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 GNB3P16520 340 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 CALCRP30988 508 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 DGCR2P98153 550 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
SMAD9-201ENST00000350148 KIRREL1Q96J84 757 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 OR4C45A6NMZ5 311 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ERVH48-1M5A8F1 160 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF32P17041 273 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 TMEM11P17152 192 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 CNTNAP3Q9BZ76 1288 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 SLC25A31Q9H0C2 315 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 CD96P40200 585 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 RPS4XP62701 263 aaKnown RBP10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ANKRD16Q6P6B7 361 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 DBX2Q6ZNG2 339 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 SLC16A13Q7RTY0 426 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF611Q8N823 705 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 MRPS24Q96EL2 167 aaKnown RBP10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF107Q9UII5 783 aaPredicted RBP10.78□□□□□ -0.68
SMAD9-201ENST00000350148 CRYBA2P53672 197 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 ABLIM2Q6H8Q1 611 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 GFRALQ6UXV0 394 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 APCDD1LQ8NCL9 501 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 HRASLSQ9HDD0 168 aa10.78□□□□□ -0.68
SMAD9-201ENST00000350148 MRPS18CQ9Y3D5 142 aaKnown RBP10.78□□□□□ -0.68
SMAD9-201ENST00000350148 HELZP42694 1942 aaKnown RBP10.77□□□□□ -0.68
SMAD9-201ENST00000350148 A0A096LPE4 126 aa10.77□□□□□ -0.68
SMAD9-201ENST00000350148 A0A1W2PPZ6 126 aa10.77□□□□□ -0.68
SMAD9-201ENST00000350148 SCGB2A1O75556 95 aa10.77□□□□□ -0.68
SMAD9-201ENST00000350148 C1QBP02746 253 aa10.77□□□□□ -0.68
SMAD9-201ENST00000350148 TLE4Q04727 773 aa10.77□□□□□ -0.68
SMAD9-201ENST00000350148 LBHQ53QV2 105 aaPredicted RBP10.77□□□□□ -0.68
SMAD9-201ENST00000350148 GMPPAQ96IJ6 420 aaPredicted RBP10.77□□□□□ -0.68
SMAD9-201ENST00000350148 TMPRSS5Q9H3S3 457 aa10.77□□□□□ -0.68
SMAD9-201ENST00000350148 A0A1B0GUH1 482 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 A0A1W2PPH5 198 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 GSTZ1O43708 216 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-201ENST00000350148 FGF7P21781 194 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 HAAOP46952 286 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 ROM1Q03395 351 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 PPP1R32Q7Z5V6 425 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 VASH2Q86V25 355 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 FAM58AQ8N1B3 248 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 OSR2Q8N2R0 312 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 OR6K3Q8NGY3 331 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 TTTY12Q9BZ98 90 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 NXF2Q9GZY0 626 aaKnown RBP10.77□□□□□ -0.69
SMAD9-201ENST00000350148 PIGMQ9H3S5 423 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 PLEKHB1Q9UF11 243 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-201ENST00000350148 RER1O15258 196 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 SPINT2O43291 252 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 HIST2H3AQ71DI3 136 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 CHAC2Q8WUX2 184 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms