RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 hCG_2014768A0A024R1R8 64 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 LANCL1O43813 399 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 CDC14BO60729 498 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 CD3GP09693 182 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 ZNF35P13682 527 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 PPA1Q15181 289 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 CDH24Q86UP0 819 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 C1orf174Q8IYL3 243 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 TOMM5Q8N4H5 51 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 OR1J1Q8NGS3 322 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 HIST1H2AAQ96QV6 131 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 GAL3ST1Q99999 423 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 NUDT16L1Q9BRJ7 211 aaKnown RBP16.07■□□□□ 0.16
PTN-201ENST00000348225 URM1Q9BTM9 101 aaKnown RBP16.07■□□□□ 0.16
PTN-201ENST00000348225 TMEM59Q9BXS4 323 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 AUNIPQ9H7T9 357 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 MEMO1Q9Y316 297 aa16.07■□□□□ 0.16
PTN-201ENST00000348225 PLA2G10O15496 165 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 CRTAPO75718 401 aaPredicted RBP16.06■□□□□ 0.16
PTN-201ENST00000348225 MPIG6BO95866 241 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 TMEM225BP0DP42 221 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 SELEP16581 610 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 CA7P43166 264 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 ZP1P60852 638 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 SLC22A6Q4U2R8 563 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 OR52I2Q8NH67 350 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 ITPKCQ96DU7 683 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 BCL2L14Q9BZR8 327 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 METTL9Q9H1A3 318 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 JKAMPQ9P055 326 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 MPC1Q9Y5U8 109 aa16.06■□□□□ 0.16
PTN-201ENST00000348225 LYRM1O43325 122 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 ECDO95905 644 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 CHRM2P08172 466 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 RAC2P15153 192 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 GDNFP39905 211 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 LY6DQ14210 128 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 GPR176Q14439 515 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 CEACAM21Q3KPI0 293 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 NCCRP1Q6ZVX7 275 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 NRARPQ7Z6K4 114 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 ACBD4Q8NC06 268 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 RELL2Q8NC24 303 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 SLC25A40Q8TBP6 338 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 ENKURQ8TC29 256 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 CCDC120Q96HB5 630 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 OR2J1Q9GZK6 312 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 ELL3Q9HB65 397 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 IGKV1-27A0A075B6S5 117 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 IGHV2OR16-5A0A0B4J2B6 119 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 CENPXA8MT69 81 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 ZNF780AO75290 641 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 GSTT2BP0CG30 244 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 PRSS3P35030 304 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 RFX2P48378 723 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 AP3S2P59780 193 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 FAM27E3Q08E93 113 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 OR2T2Q6IF00 324 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 CCBE1Q6UXH8 406 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 SSX8Q7RTT4 187 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 BHLHE23Q8NDY6 225 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 TMEM104Q8NE00 496 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 GCDHQ92947 438 aaPredicted RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 CMBLQ96DG6 245 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 C7orf50Q9BRJ6 194 aaKnown RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 LPAR5Q9H1C0 372 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 FAIMQ9NVQ4 179 aa16.05■□□□□ 0.16
PTN-201ENST00000348225 RBFOX1Q9NWB1 397 aaKnown RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 MRPL15Q9P015 296 aaKnown RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 RBMX2Q9Y388 322 aaKnown RBP16.05■□□□□ 0.16
PTN-201ENST00000348225 DSPP15924 2871 aaKnown RBP16.04■□□□□ 0.16
PTN-201ENST00000348225 MYO7BQ6PIF6 2116 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 RP1L1Q8IWN7 2480 aaPredicted RBP16.04■□□□□ 0.16
PTN-201ENST00000348225 C16orf97H3BN30 126 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 SULT1C2O00338 296 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 SERPINA2P20848 420 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 ZNF83P51522 516 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 DNM1P46Q6ZS02 220 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 C1QL2Q7Z5L3 287 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 LIX1LQ8IVB5 337 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 OR56B1Q8NGI3 324 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 OR5A2Q8NGI9 324 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 OR10A4Q9H209 315 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 BANF2Q9H503 90 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 SCPEP1Q9HB40 452 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 PCDHB16Q9NRJ7 776 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 CACNG2Q9Y698 323 aa16.04■□□□□ 0.16
PTN-201ENST00000348225 ZZEF1O43149 2961 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 PQLC2LA1A4F0 135 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 M0R1B8 84 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 RAB27BO00194 218 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 ORC5O43913 435 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 CSTBP04080 98 aaKnown RBP16.03■□□□□ 0.16
PTN-201ENST00000348225 SPNP16150 400 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 MGMTP16455 207 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 VEGFCP49767 419 aa16.03■□□□□ 0.16
PTN-201ENST00000348225 RPS27AP62979 156 aaKnown RBP16.03■□□□□ 0.16
PTN-201ENST00000348225 NAAAQ02083 359 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms