RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 C2orf76Q3KRA6 126 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 BATF2Q8N1L9 274 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 OR10AD1Q8NGE0 317 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 KTI12Q96EK9 354 aaPredicted RBP9.71□□□□□ -0.85
CLCN6-202ENST00000346436 GMPPAQ96IJ6 420 aaPredicted RBP9.71□□□□□ -0.85
CLCN6-202ENST00000346436 NMNAT2Q9BZQ4 307 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 CHODLQ9H9P2 273 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 MMP25Q9NPA2 562 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 ETV7Q9Y603 341 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 GREB1Q4ZG55 1949 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 A0A0B4J2E0 115 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 A0A1B0GX12 115 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 PYCARD-AS1I3L0S3 204 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 MSTNO14793 375 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 IFITM2Q01629 132 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 SMIM4Q8WVI0 70 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 MOB3AQ96BX8 217 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 TXN2Q99757 166 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 NXF2Q9GZY0 626 aaKnown RBP9.71□□□□□ -0.85
CLCN6-202ENST00000346436 RAB22AQ9UL26 194 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 IFNL4K9M1U5 179 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 AQP8O94778 261 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 ZFPL1O95159 310 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 GNG3P63215 75 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 TMEM91Q6ZNR0 172 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 SYS1Q8N2H4 156 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 OR4C16Q8NGL9 310 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 DYNLRB2Q8TF09 96 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-202ENST00000346436 PTP4A1Q93096 173 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 RALGAPA2Q2PPJ7 1873 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 TNS1Q9HBL0 1735 aaKnown RBP9.71□□□□□ -0.86
CLCN6-202ENST00000346436 PDLIM4P50479 330 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 MMP15P51511 669 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 ZNF85Q03923 595 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 ZBTB44Q8NCP5 570 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 CCL19Q99731 98 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 MARVELD1Q9BSK0 173 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 MED29Q9NX70 200 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 NTMQ9P121 344 aa9.71□□□□□ -0.86
CLCN6-202ENST00000346436 HRKO00198 91 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PLPP2O43688 288 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PDGFBP01127 241 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PI3P19957 117 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PLA1AQ53H76 456 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ZNF362Q5T0B9 420 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ADGRG3Q86Y34 549 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ZNF679Q8IYX0 411 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 UBAC2Q8NBM4 344 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PXT1Q8NFP0 134 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 OR1F12Q8NHA8 337 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PARP12Q9H0J9 701 aaKnown RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 RAB6AP20340 208 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ZIC1Q15915 447 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 OR13D1Q8NGV5 346 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 DHRS9Q9BPW9 319 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 SCN10AQ9Y5Y9 1956 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 LOC107986453A0A1B0GWG9 222 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 TPT1P13693 172 aaKnown RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 RPS27AP62979 156 aaKnown RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 UBA52P62987 128 aaKnown RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 PTPMT1Q8WUK0 201 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 NUDCD2Q8WVJ2 157 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 BSCL2Q96G97 398 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 IGKV1-8A0A0C4DH67 115 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 TMEM30CPA0ZSE6 113 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 CALCBP10092 127 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 SELENOPP49908 381 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 HTD2P86397 168 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 EBPQ15125 230 aaKnown RBP9.7□□□□□ -0.86
CLCN6-202ENST00000346436 TMPRSS11FQ6ZWK6 438 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ANGPTL5Q86XS5 388 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 OR2G2Q8NGZ5 317 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 LRFN3Q9BTN0 628 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 LPAR3Q9UBY5 353 aa9.7□□□□□ -0.86
CLCN6-202ENST00000346436 ZNF785A8K8V0 405 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 NKX2-8O15522 239 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 GMDSO60547 372 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 GIPP09681 153 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 RAC3P60763 192 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TLE1Q04724 770 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 AANATQ16613 207 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 PRICKLE4Q2TBC4 344 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 CCDC144NLQ6NUI1 221 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TIPARPQ7Z3E1 657 aaKnown RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 ADGRE4PQ86SQ3 457 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 OR2T6Q8NHC8 308 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 HPSE2Q8WWQ2 592 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 DNASE2BQ8WZ79 361 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TAAR6Q96RI8 345 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 RASL11BQ9BPW5 248 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 RPS10P5Q9NQ39 176 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 C1orf123Q9NWV4 160 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms