RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MARS2Q96GW9 593 aaKnown RBP11.73□□□□□ -0.53
TPM4-202ENST00000344824 DERL3Q96Q80 235 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 FAM192AQ9GZU8 254 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 PLEKHA1Q9HB21 404 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 DECR2Q9NUI1 292 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 TBCCD1Q9NVR7 557 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 GSTK1Q9Y2Q3 226 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 DYSFO75923 2080 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 IGHV4-61A0A0C4DH41 118 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 VWC2LB2RUY7 222 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 CD5LO43866 347 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 IGLV3-1P01715 115 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 ZNF20P17024 532 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 GNALP38405 381 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 SERPINB10P48595 397 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 GK2Q14410 553 aaPredicted RBP11.72□□□□□ -0.53
TPM4-202ENST00000344824 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 ZNF420Q8TAQ5 688 aaPredicted RBP11.72□□□□□ -0.53
TPM4-202ENST00000344824 NDNFQ8TB73 568 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 RDH5Q92781 318 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
TPM4-202ENST00000344824 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
TPM4-202ENST00000344824 SAP30LQ9HAJ7 183 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
TPM4-202ENST00000344824 hCG_38984A0A1B0GV85 526 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 LRP5LA4QPB2 252 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 GGT3PA6NGU5 568 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 PIN1P1O15428 100 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 SC5DO75845 299 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 GATBO75879 557 aaKnown RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 DHRS3O75911 302 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 CD2P06729 351 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 FAHP16930 419 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 CCL1P22362 96 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 MYL9P24844 172 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 MAPK3P27361 379 aaPredicted RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 GPR6P46095 362 aaPredicted RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 GSK3AP49840 483 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 FAM3AP98173 230 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 MXD1Q05195 221 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 SPCS2Q15005 226 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 HSD17B12Q53GQ0 312 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 TMEM255AQ5JRV8 349 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 MBNL2Q5VZF2 373 aaKnown RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 UNQ9370/PRO34162Q6UXP9 181 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 C1orf174Q8IYL3 243 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 OR5AS1Q8N127 324 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 ADAT3Q96EY9 351 aaPredicted RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 KCTD7Q96MP8 289 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 RGCCQ9H4X1 137 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 MSL2Q9HCI7 577 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 ZNF275Q9NSD4 429 aaPredicted RBP11.71□□□□□ -0.53
TPM4-202ENST00000344824 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 PIGLQ9Y2B2 252 aa11.71□□□□□ -0.53
TPM4-202ENST00000344824 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 PPIHO43447 177 aaKnown RBP11.7□□□□□ -0.54
TPM4-202ENST00000344824 CDRT1O95170 752 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 UCHL1P09936 223 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 HOXB4P17483 251 aaPredicted RBP11.7□□□□□ -0.54
TPM4-202ENST00000344824 GALP22466 123 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 CFL1P23528 166 aaKnown RBP11.7□□□□□ -0.54
TPM4-202ENST00000344824 COL8A2P25067 703 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 ACKR3P25106 362 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 FGF9P31371 208 aaPredicted RBP11.7□□□□□ -0.54
TPM4-202ENST00000344824 MAP2K3P46734 347 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 SEMA6DQ8NFY4 1073 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 YIPF5Q969M3 257 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 SPSB4Q96A44 273 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 CMBLQ96DG6 245 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 ZNF391Q9UJN7 358 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 V9GYS6 101 aa11.7□□□□□ -0.54
TPM4-202ENST00000344824 TRAV8-7A0A075B6U6 113 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 IGHV1-69-2A0A0G2JMI3 117 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 SHISA3A0PJX4 238 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 A8MV72 311 aaPredicted RBP11.69□□□□□ -0.54
TPM4-202ENST00000344824 J3QW42 95 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 SLC22A1O15245 554 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 ICMTO60725 284 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 ARL6IP5O75915 188 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 IGHV1-46P01743 117 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 CLEC2LP0C7M8 214 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 IGHV4-31P0DP07 118 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 ZNF12P17014 697 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 SDC2P34741 201 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 MMP15P51511 669 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 RIPPLY1Q0D2K3 151 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 PSG7Q13046 419 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 DMRTC1Q5HYR2 192 aa11.69□□□□□ -0.54
TPM4-202ENST00000344824 AVPI1Q5T686 147 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms