RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PECRQ9BY49 303 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 DEPPQ9NTK1 212 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 NUP50Q9UKX7 468 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 ADAP1O75689 374 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 IGHV3-9P01782 118 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 TMEM225BP0DP42 221 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 SRD5A2P31213 254 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 OTX1P32242 354 aaPredicted RBP13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 RGS19P49795 217 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 HIST1H3AP68431 136 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 ACER2Q5QJU3 275 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 HIST2H3PS2Q5TEC6 136 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 HIST2H3AQ71DI3 136 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 GALNTL5Q7Z4T8 443 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 GGNQ86UU5 652 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 KCNRGQ8N5I3 272 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 GALNT11Q8NCW6 608 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 PP6455Q8WZ26 134 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 TMEM230Q96A57 120 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 SESN1Q9Y6P5 492 aa13.02□□□□□ -0.33
VIPAS39-202ENST00000343765 LRRC3CA6NJW4 275 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 SPRY1O43609 319 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 MTRF1O75570 445 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 LCATP04180 440 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 GDF1P27539 372 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF133P52736 654 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 MTCP1P56278 107 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 UBA52P62987 128 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 MRPS34P82930 218 aaKnown RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 PNLIPRP3Q17RR3 467 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 VAX1Q5SQQ9 334 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 FAM27BQ5VT28 67 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 FAHD2BQ6P2I3 314 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 SLC23A3Q6PIS1 610 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 AAED1Q7RTV5 226 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 OR10D3Q8NH80 312 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 HAS2Q92819 552 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 FAHD2AQ96GK7 314 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF845Q96IR2 970 aaPredicted RBP13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 OCSTAMPQ9BR26 566 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ARID1AO14497 2285 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 PINLYPA6NC86 204 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF32P17041 273 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 NAT1P18440 290 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 CALCRP30988 508 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ZXDAP98168 799 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 UNQ6126/PRO20091Q6UXV3 157 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 GPR137CQ8N3F9 429 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ARRDC1Q8N5I2 433 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 SEMA6DQ8NFY4 1073 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 ANAPC10Q9UM13 185 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 GPR132Q9UNW8 380 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
VIPAS39-202ENST00000343765 MPTX1A8MV57 137 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 BCL2L11O43521 198 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 OR2F2O95006 317 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 NAT2P11245 290 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 SLC25A4P12235 298 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 GLRA1P23415 457 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 NUP62P37198 522 aaPredicted RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 HTR5AP47898 357 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 TAS2R31P59538 309 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 SRSF4Q08170 494 aaKnown RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 OR2F1Q13607 317 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 ACTBL2Q562R1 376 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 TMEM128Q5BJH2 165 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 C6orf15Q6UXA7 325 aaPredicted RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 CLEC18BQ6UXF7 455 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 INO80EQ8NBZ0 244 aaPredicted RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 ABHD3Q8WU67 409 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 NTNG2Q96CW9 530 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 CHMP1AQ9HD42 196 aaPredicted RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 GPR160Q9UJ42 338 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 CSAG2Q9Y5P2 127 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 DMXL1Q9Y485 3027 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNHIT1O43257 154 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 SPINK14Q6IE38 97 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 ACOT7LQ6ZUV0 252 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 DCUN1D4Q92564 292 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 INTS12Q96CB8 462 aaKnown RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 TMEM38BQ9NVV0 291 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
VIPAS39-202ENST00000343765 PCDHGA1Q9Y5H4 931 aa13□□□□□ -0.33
VIPAS39-202ENST00000343765 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF716A6NP11 495 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 F5H0A9 414 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 KNG1P01042 644 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 HLA-GP17693 338 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 ZP3P21754 424 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 CPT2P23786 658 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 RAB35Q15286 201 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms