RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 OR4F4Q96R69 305 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 ESPL1Q14674 2120 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 H3BMH7 237 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 CA3P07451 260 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 PSMB3P49720 205 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 HBG1P69891 147 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 HBG2P69892 147 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 C16orf47Q6ZP98 133 aaPredicted RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 ZSCAN4Q8NAM6 433 aaPredicted RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 TCTN2Q96GX1 697 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 DTX4Q9Y2E6 619 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 HSPB2A8KAH6 182 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 CLDN34H7C241 214 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 DUX1O43812 170 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 HSPB2Q16082 182 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 ACER2Q5QJU3 275 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 NCR3LG1Q68D85 454 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 OR13D1Q8NGV5 346 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 ZNF764Q96H86 408 aaPredicted RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 REG4Q9BYZ8 158 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 NMES1Q9C002 83 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 C19orf25Q9UFG5 118 aaPredicted RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 A0A1W2PR80 420 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 VSIG8P0DPA2 414 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 ZBTB25P24278 435 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 FHITP49789 147 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 RRADP55042 308 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 RPS16P62249 146 aaKnown RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 MGAT2Q10469 447 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 PSMF1Q92530 271 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 MR1Q95460 341 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 FAAP24Q9BTP7 215 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 FIGNL2A6NMB9 653 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 EFSO43281 561 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 EML2O95834 649 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 PNPP00491 289 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 KLK3P07288 261 aaPredicted RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 FGF8P55075 233 aaPredicted RBP11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 PMS2P11Q13670 270 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 BCO1Q9HAY6 547 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
SSX2IP-201ENST00000342203 C9J4A7 227 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 SOX15O60248 233 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ZIC2O95409 532 aaPredicted RBP11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 CD79AP11912 226 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ZNF117Q03924 483 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ARV1Q9H2C2 271 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 RBFOX3A6NFN3 312 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 PRAMEF26H0Y7S4 382 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 H3BQ15 152 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 EIF4E2O60573 245 aaKnown RBP11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 LMX1BO60663 402 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 IGHV3-9P01782 118 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 CARD18P57730 90 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 SRPXP78539 464 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 DLK1P80370 383 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 PLXDC1Q8IUK5 500 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ENY2Q9NPA8 101 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 CENPFP49454 3210 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 PQLC2LA1A4F0 135 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 UPK3AO75631 287 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ECI1P42126 302 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 DHRS7BQ6IAN0 325 aaPredicted RBP11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 DBX2Q6ZNG2 339 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 WDR13Q9H1Z4 485 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 TRAV14DV4A0A0A6YYC5 116 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 HEXAP06865 529 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 MSX1P28360 303 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 ZNF133P52736 654 aaPredicted RBP11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 LTC4SQ16873 150 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 NT5CQ8TCD5 201 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 FAM60AQ9NP50 221 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
SSX2IP-201ENST00000342203 XKRY2A2RUG3 117 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 TRGC2P03986 189 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 CALCRP30988 508 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 KISS1Q15726 138 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 GJC3Q8NFK1 279 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 ANKRD10Q9NXR5 420 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 DOK5Q9P104 306 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 SCN4AP35499 1836 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 MDFIC2A0A1B0GVS7 189 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 BLACEA4D250 179 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 CD200P41217 278 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 NOVA1P51513 510 aaKnown RBP11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 ERVS71-1P61550 626 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 RNF4P78317 190 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 DRAM2Q6UX65 266 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 ARHGEF39Q8N4T4 335 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 IL22RA1Q8N6P7 574 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 UBALD1Q8TB05 177 aa11.15□□□□□ -0.62
SSX2IP-201ENST00000342203 COX14Q96I36 57 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms