RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 OSGIN2Q9Y236 505 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 PTRH2Q9Y3E5 179 aaKnown RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 HS3ST3B1Q9Y662 390 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 M0R135 149 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 APOC3P02656 99 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 HPNP05981 417 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 ATF4P18848 351 aaPredicted RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 CPT2P23786 658 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 ZNF273Q14593 569 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 SLC9A3R2Q15599 337 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 UNQ6126/PRO20091Q6UXV3 157 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 MAML2Q8IZL2 1156 aaPredicted RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 CCDC54Q8NEL0 328 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 ZNF799Q96GE5 643 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 RBM24Q9BX46 236 aaKnown RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 PIGLQ9Y2B2 252 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 CCDC163A0A0D9SF12 145 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 M0R296 226 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 KCNAB3O43448 404 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
TDP2-201ENST00000341060 FCGR2AP12318 317 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 PI3P19957 117 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 NAAAQ02083 359 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 TMEM105Q8N8V8 129 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 CSNK2A3Q8NEV1 391 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 MR1Q95460 341 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 INTS12Q96CB8 462 aaKnown RBP12.75□□□□□ -0.37
TDP2-201ENST00000341060 S100A13Q99584 98 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 PIGMQ9H3S5 423 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 PLEK2Q9NYT0 353 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 EHFQ9NZC4 300 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
TDP2-201ENST00000341060 C9J4A7 227 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 H0YIZ8 118 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 TRIM77I1YAP6 450 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 YKT6O15498 198 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 CA11O75493 328 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 ADAP1O75689 374 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 LYL1P12980 280 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 TDGF1P13385 188 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 RAC1P63000 192 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 SURF2Q15527 256 aaPredicted RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 RTL6Q6ICC9 239 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 CCDC36Q8IYA8 594 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 ZIC4Q8N9L1 334 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 ZSCAN4Q8NAM6 433 aaPredicted RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 RRNAD1Q96FB5 475 aaKnown RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 JSRP1Q96MG2 331 aaPredicted RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 ULBP2Q9BZM5 246 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 G3V3Y1 287 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 SDCBPO00560 298 aaPredicted RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 FGF16O43320 207 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 HTR3BO95264 441 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 DBHP09172 617 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 RPS2P15880 293 aaKnown RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 HOXA6P31267 233 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 ZNF84P51523 738 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 MRPS34P82930 218 aaKnown RBP12.74□□□□□ -0.37
TDP2-201ENST00000341060 PPA1Q15181 289 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 FAM27BQ5VT28 67 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 UQCC3Q6UW78 93 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 TMEM156Q8N614 296 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 AGBL5Q8NDL9 886 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 OR2Y1Q8NGV0 311 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 SPTSSAQ969W0 71 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 FBXO17Q96EF6 278 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 HPF1Q9NWY4 346 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 PCDHB10Q9UN67 800 aa12.74□□□□□ -0.37
TDP2-201ENST00000341060 A0A0J9YW62 118 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 MPTX1A8MV57 137 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 NTN3O00634 580 aaPredicted RBP12.73□□□□□ -0.37
TDP2-201ENST00000341060 TNFSF11O14788 317 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 CBR3O75828 277 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 PRSS54Q6PEW0 395 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 RPS19BP1Q86WX3 136 aaKnown RBP12.73□□□□□ -0.37
TDP2-201ENST00000341060 BAP18Q8IXM2 172 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 C20orf196Q8IYI0 205 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 MAFIPQ8WZ33 124 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 PIGTQ969N2 578 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 PIGQQ9BRB3 760 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 FIGNL2A6NMB9 653 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 DHRS7CA6NNS2 312 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 MLF1P58340 268 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 MC2RQ01718 297 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 TRA2AQ13595 282 aaKnown RBP eCLIP12.73□□□□□ -0.37
TDP2-201ENST00000341060 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 CHRFAM7AQ494W8 412 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 ATRAIDQ6UW56 229 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms