RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CRYM-AS1A6NIL9 109 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR5B21A6NL26 309 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 M0R2Z0 102 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CACNG3O60359 315 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NDUFS6O75380 124 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PIRTP0C851 137 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 HIST1H1EP10412 219 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ACRV1P26436 265 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PPP1CCP36873 323 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PTGFRP43088 359 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DSCR9P59020 149 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PCLAFQ15004 111 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GLDNQ6ZMI3 551 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF547Q8IVP9 402 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 WDR31Q8NA23 367 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF738Q8NE65 137 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 BCL2L2Q92843 193 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC35A4Q96G79 324 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TOLLIPQ9H0E2 274 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF160Q9HCG1 818 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ICAM5Q9UMF0 924 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A10PA6NDY2 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A18PA6NE21 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A16PA6NEW6 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A20PA6NIJ5 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A8PA6NJQ4 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A7PA6NKC0 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A22PA8MWA6 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A12PA8MX19 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A5PA8MXJ8 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A23PA8MXZ1 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ARPC3O15145 178 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 STC2O76061 302 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GAPDHP04406 335 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A15PP0C7V4 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A13PP0C7W8 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A14PP0C7W9 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A24PP0C7X0 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR10J1P30954 320 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RPL34P49207 117 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 IL13RA2Q14627 380 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 LRRC10Q5BKY1 277 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NHSL2Q5HYW2 709 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CNIH2Q6PI25 160 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TSEN54Q7Z6J9 526 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DTX1Q86Y01 620 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF679Q8IYX0 411 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR6S1Q8NH40 331 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR10J5Q8NHC4 309 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 KTI12Q96EK9 354 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PIK3IP1Q96FE7 263 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PACRGQ96M98 296 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR2V2Q96R30 315 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TEAD3Q99594 435 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MGST2Q99735 147 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ACPTQ9BZG2 426 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MMP26Q9NRE1 261 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR1A1Q9P1Q5 309 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF264O43296 627 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ENSAO43768 121 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 VNN1O95497 513 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CLDN14O95500 239 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 HLA-DQB2P05538 268 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NKX2-1P43699 371 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 IFITM2Q01629 132 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RGS7BPQ6MZT1 257 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC36A1Q7Z2H8 476 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 WDTC1Q8N5D0 677 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR4A16Q8NH70 328 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 VN1R17PQ8TDU5 208 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 EGLN2Q96KS0 407 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 COMMD5Q9GZQ3 224 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 LINC00597Q9H2U6 94 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DUSP21Q9H596 190 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TAF9BQ9HBM6 251 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GCM1Q9NP62 436 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 C17orf105B2RV13 164 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NDUFA2O43678 99 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ALPLP05186 524 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RPLP1P05386 114 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CD37P11049 281 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC2A1P11166 492 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GALNSP34059 522 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NPBWR1P48145 328 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MVDP53602 400 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TBPL1P62380 186 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF273Q14593 569 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZBTB37Q5TC79 503 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 LHFPL2Q6ZUX7 228 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PAQR8Q8TEZ7 354 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GHSRQ92847 366 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CALHM2Q9HA72 323 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PRSS16Q9NQE7 514 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CCDC168Q8NDH2 2452 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 C2orf16Q68DN1 1984 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 KBTBD11-OT1A0A1B0GTJ5 212 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1W2PPQ1 181 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ANTXRLA6NF34 631 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NPIPB13A6NJU9 1138 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZBTB42B2RXF5 422 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms