RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TRAPPC6BQ86SZ2 158 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 OR51S1Q8NGJ8 323 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 OR51T1Q8NGJ9 327 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 APOBEC3DQ96AK3 386 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 BORCS8Q96FH0 119 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 CST11Q9H112 138 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 NEK6Q9HC98 313 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 KCNK7Q9Y2U2 307 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF850A8MQ14 1090 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 AHRRA9YTQ3 701 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 TRAPPC2P0DI81 140 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 TRAPPC2BP0DI82 140 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 ZP1P60852 638 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 RRAS2P62070 204 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 RAB3CQ96E17 227 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 REPIN1Q9BWE0 567 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 GHITMQ9H3K2 345 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF629Q9UEG4 869 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 GPR160Q9UJ42 338 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 SSUH2Q9Y2M2 353 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 BSNQ9UPA5 3926 aa19.38■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF816-ZNF321PA0A0X1KG74 233 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 FAUP35544 74 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 ALDH3B1P43353 468 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 RBP2P50120 134 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 PER3P56645 1201 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 C3P1Q6ZMU1 363 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 Q6ZT83 130 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 SLC30A7Q8NEW0 376 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 NANOS1Q8WY41 292 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 EXTL1Q92935 676 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 ARHGAP5-AS1Q96IT6 56 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF75AQ96N20 296 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 TINAGL1Q9GZM7 467 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 TP53TG5Q9Y2B4 290 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 SPTBN4Q9H254 2564 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 CYB5AP00167 134 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 CHRM2P08172 466 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 RPS27AP62979 156 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 TGFBR3Q03167 851 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 OR52W1Q6IF63 320 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 SEM1Q6ZVN7 128 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 MRPL21Q7Z2W9 205 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 RPRMLQ8N4K4 120 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 BHLHE23Q8NDY6 225 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 URM1Q9BTM9 101 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 C1QTNF6Q9BXI9 259 aa19.37■□□□□ 0.69
PDLIM2-203ENST00000339162 C7orf66A4D0T2 115 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 OR14I1A6ND48 311 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 SERPINA5P05154 406 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 TPOP07202 933 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 PRKACBP22694 351 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 RCVRNP35243 200 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 MALLQ13021 153 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 PAPOLGQ9BWT3 736 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 GHRLQ9UBU3 117 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 KCNN3Q9UGI6 736 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 SSX5O60225 188 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 PEX14O75381 377 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 CSN2P05814 226 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 TAS2R19P59542 299 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 UBE2NP61088 152 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 SSBP1Q04837 148 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 ST3GAL2Q16842 350 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 NSUN5P2Q63ZY6 315 aa19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF71Q9NQZ8 489 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-203ENST00000339162 RP1L1Q8IWN7 2480 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 SCGNO76038 276 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 RAB3DO95716 219 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 MELTFP08582 738 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 HIST1H1DP16402 221 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 ANXA7P20073 488 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 IDH3GP51553 393 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 FCN2Q15485 313 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 GABRA6Q16445 453 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 SPATA46Q5T0L3 261 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 RFPL4BQ6ZWI9 263 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 TMEM229BQ8NBD8 167 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 OR56B1Q8NGI3 324 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 GPR137Q96N19 417 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 GINS4Q9BRT9 223 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 ACTR6Q9GZN1 396 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 OR51J1Q9H342 316 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF736B4DX44 427 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 TNFSF13O75888 250 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 TOXO94900 526 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 NDUFB6O95139 128 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 HTR3BO95264 441 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 HPXP02790 462 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 RAD52P43351 418 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 RTL6Q6ICC9 239 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 LHFPL2Q6ZUX7 228 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 BATF2Q8N1L9 274 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 OR6K3Q8NGY3 331 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 OPN3Q9H1Y3 402 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 MED28Q9H204 178 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 SLC7A11Q9UPY5 501 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 MSRB2Q9Y3D2 182 aa19.35■□□□□ 0.69
PDLIM2-203ENST00000339162 INTS1Q8N201 2190 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 PYCARD-AS1I3L0S3 204 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms