RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 WDR54Q9H977 334 aa9.48□□□□□ -0.89
RTN3-201ENST00000338850 PNRC2Q9NPJ4 139 aaKnown RBP9.48□□□□□ -0.89
RTN3-201ENST00000338850 TMEM100Q9NV29 134 aa9.48□□□□□ -0.89
RTN3-201ENST00000338850 DNAJB11Q9UBS4 358 aa9.48□□□□□ -0.89
RTN3-201ENST00000338850 GPR132Q9UNW8 380 aa9.48□□□□□ -0.89
RTN3-201ENST00000338850 RP1L1Q8IWN7 2480 aaPredicted RBP9.48□□□□□ -0.89
RTN3-201ENST00000338850 COL12A1Q99715 3063 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 TRBV11-1A0A0K0K1C0 115 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 C17orf51A8MQB3 221 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 SERPINE3A8MV23 424 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 ABCD4O14678 606 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 VAMP5O95183 116 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 IFNA6P05013 189 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 PET100P0DJ07 73 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 NAT2P11245 290 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 PRKACBP22694 351 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 OTX1P32242 354 aaPredicted RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 GNALP38405 381 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 ZNF84P51523 738 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 SUCLG1P53597 346 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 EMP2P54851 167 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 CLRN1P58418 232 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 EIF5AP63241 154 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 DCDP81605 110 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 ECH1Q13011 328 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 INPP5JQ15735 1006 aaPredicted RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 GFOD2Q3B7J2 385 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 SMUG1Q53HV7 270 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 SLC16A14Q7RTX9 510 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 CPEB2Q7Z5Q1 589 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 INO80EQ8NBZ0 244 aaPredicted RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 ACBD4Q8NC06 268 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 TERB2Q8NHR7 220 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 PP6455Q8WZ26 134 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 INTS12Q96CB8 462 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 SPACA9Q96E40 222 aaPredicted RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 MRPS24Q96EL2 167 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 AIFM2Q9BRQ8 373 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 PDCD10Q9BUL8 212 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 TMEM59Q9BXS4 323 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 CENPMQ9NSP4 180 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 MED29Q9NX70 200 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 MYOTQ9UBF9 498 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 MRPS28Q9Y2Q9 187 aaKnown RBP9.47□□□□□ -0.89
RTN3-201ENST00000338850 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
RTN3-201ENST00000338850 ALPK2Q86TB3 2170 aa9.46□□□□□ -0.89
RTN3-201ENST00000338850 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR2AT4A6NND4 320 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 C9J4A7 227 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 TP53I11O14683 189 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 EFNA2O43921 213 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 CDC14BO60729 498 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 ZNF354AO60765 605 aaPredicted RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 SPDEFO95238 335 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 SFT2D2O95562 160 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 H2AFB1P0C5Y9 115 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 TPT1P13693 172 aaKnown RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 ZNF17P17021 662 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 PSMB6P28072 239 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 HRH1P35367 487 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 PPIAP62937 165 aaKnown RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 OC90Q02509 493 aaPredicted RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 SCGB2B2Q4G0G5 96 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 C1orf189Q5VU69 101 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 ARSKQ6UWY0 536 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 CFAP77Q6ZQR2 320 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 ARMC10Q8N2F6 343 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 GTPBP8Q8N3Z3 284 aaPredicted RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 PNLDC1Q8NA58 520 aaKnown RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR4K17Q8NGC6 315 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR8B12Q8NGG6 310 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR13C9Q8NGT0 318 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR10K1Q8NGX5 313 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR14K1Q8NGZ2 314 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 OR4K15Q8NH41 348 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 TMEM54Q969K7 222 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 RAB3CQ96E17 227 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 CPNE2Q96FN4 548 aaPredicted RBP9.46□□□□□ -0.9
RTN3-201ENST00000338850 FOXN4Q96NZ1 517 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 AQP10Q96PS8 301 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 SPSB2Q99619 263 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 SLC7A5P2Q9GIP4 190 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 DECR2Q9NUI1 292 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 KLRF1Q9NZS2 232 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 GPR160Q9UJ42 338 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 KCNK7Q9Y2U2 307 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 V9GYS6 101 aa9.46□□□□□ -0.9
RTN3-201ENST00000338850 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 TAAR5O14804 337 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 LMX1BO60663 402 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 EIF1BO60739 113 aaKnown RBP9.45□□□□□ -0.9
RTN3-201ENST00000338850 KLF7O75840 302 aaPredicted RBP9.45□□□□□ -0.9
RTN3-201ENST00000338850 SCO1O75880 301 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 UQCRFS1P47985 274 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 STARP49675 285 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 RRADP55042 308 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 H3F3AP84243 136 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms