RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 OR4S1Q8NGB4 309 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 OR1L1Q8NH94 360 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 RPL3LQ92901 407 aaKnown RBP11.03□□□□□ -0.64
FN1-202ENST00000336916 GPR78Q96P69 363 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 ATRXP46100 2492 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 IGHV3-20A0A0C4DH32 117 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 BAK1Q16611 211 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 NRARPQ7Z6K4 114 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 MOB3BQ86TA1 216 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 CALHM3Q86XJ0 350 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 CCDC71Q8IV32 467 aaPredicted RBP11.03□□□□□ -0.64
FN1-202ENST00000336916 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
FN1-202ENST00000336916 CXCL13O43927 109 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 GFERP55789 205 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
FN1-202ENST00000336916 CCSMST1Q4G0I0 132 aa11.03□□□□□ -0.64
FN1-202ENST00000336916 ZNF17P17021 662 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 INSM1Q01101 510 aaPredicted RBP11.02□□□□□ -0.64
FN1-202ENST00000336916 ZNF750Q32MQ0 723 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 ST8SIA4Q92187 359 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 MED30Q96HR3 178 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 MED9Q9NWA0 146 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 RNF2Q99496 336 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.64
FN1-202ENST00000336916 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.64
FN1-202ENST00000336916 CTSLP07711 333 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 B4GALT1P15291 398 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 RHBDD2Q6NTF9 364 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR8U1Q8NH10 309 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OTOSQ8NHW6 89 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 FYTTD1Q96QD9 318 aaKnown RBP11.02□□□□□ -0.65
FN1-202ENST00000336916 RAB40CQ96S21 281 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 VN1R1Q9GZP7 353 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 SIRPB1O00241 398 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 TMPRSS11DO60235 418 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 ZNF26P17031 533 aaPredicted RBP11.02□□□□□ -0.65
FN1-202ENST00000336916 HRH1P35367 487 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR10R2Q8NGX6 335 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR4C3Q8NH37 302 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 C8orf44Q96CB5 159 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 TICRRQ7Z2Z1 1910 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 CNN1P51911 297 aaKnown RBP11.02□□□□□ -0.65
FN1-202ENST00000336916 BPIFCQ8NFQ6 507 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR5M1Q8NGP8 315 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 FOXB1Q99853 325 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 MFRPQ9BY79 579 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 CTDSP2O14595 271 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 MBTPS2O43462 519 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 FZD6O60353 706 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 MEOX1P50221 254 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 CDK5Q00535 292 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 TP53I13Q8NBR0 393 aaPredicted RBP11.02□□□□□ -0.65
FN1-202ENST00000336916 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR10G3Q8NGC4 313 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR1L4Q8NGR5 311 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR4F5Q8NH21 305 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 GABRG3Q99928 467 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 MPC1Q9Y5U8 109 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 A0A1W2PNR3 127 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 POU4F3Q15319 338 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 CEACAM16Q2WEN9 425 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 TMEM229BQ8NBD8 167 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 FBXL2Q9UKC9 423 aa11.02□□□□□ -0.65
FN1-202ENST00000336916 FABP6P51161 128 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 HCCSP53701 268 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 NDUFA6P56556 154 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 C21orf58P58505 322 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 AVPI1Q5T686 147 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 NKAIN4Q8IVV8 208 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 ADPRHL1Q8NDY3 354 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 PLA2G12AQ9BZM1 189 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 IL20Q9NYY1 176 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 B9D1Q9UPM9 204 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 SDCBPO00560 298 aaPredicted RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 BEX5Q5H9J7 111 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 CXXC4Q9H2H0 198 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 CGGBP1Q9UFW8 167 aaPredicted RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 KCNMB2Q9Y691 235 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 NKX2-2O95096 273 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 TMPRSS11FQ6ZWK6 438 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 PRSS42Q7Z5A4 293 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 UBAC2Q8NBM4 344 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 OR2Y1Q8NGV0 311 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 LSM2Q9Y333 95 aaKnown RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 H7BYZ3 331 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 TFAP2AP05549 437 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 LSM6P62312 80 aaKnown RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 RPUSD3Q6P087 351 aaKnown RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 OR6X1Q8NH79 312 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 ZNF724A8MTY0 619 aa11.01□□□□□ -0.65
FN1-202ENST00000336916 SMN1Q16637 294 aaKnown RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 B3GNTL1Q67FW5 361 aaPredicted RBP11.01□□□□□ -0.65
FN1-202ENST00000336916 SIGLECL1Q8N7X8 197 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms