RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 OR13C9Q8NGT0 318 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TRMT10AQ8TBZ6 339 aaKnown RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 YIPF5Q969M3 257 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TECTBQ96PL2 329 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 FOXC2Q99958 501 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 MRPS26Q9BYN8 205 aaKnown RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TAS2R4Q9NYW5 299 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ITGB1BP2Q9UKP3 347 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CACNG2Q9Y698 323 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 IGKV1-9A0A0C4DH69 117 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 FAM230AA0A1W2PPH8 454 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR5B21A6NL26 309 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 A6NLC8 198 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 TMEM210A6NLX4 147 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 PSMA1P25786 263 aaKnown RBP11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 ART1P52961 327 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 GNG3P63215 75 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 HNRNPA0Q13151 305 aaKnown RBP11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 MPPED2Q15777 294 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 ASPHD2Q6ICH7 369 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 UNQ9370/PRO34162Q6UXP9 181 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 CEACAM19Q7Z692 300 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR1M1Q8NGA1 313 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 ZNF420Q8TAQ5 688 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 CCL17Q92583 94 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 THRSPQ92748 146 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 ORAI1Q96D31 301 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 DERL3Q96Q80 235 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 FN3KRPQ9HA64 309 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 GCM1Q9NP62 436 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 NOX4Q9NPH5 578 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 NDUFB11Q9NX14 153 aa11.91□□□□□ -0.5
APOBEC3B-202ENST00000335760 PQLC2LA1A4F0 135 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 PIN1P1O15428 100 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 SULT1B1O43704 296 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 RGS9O75916 674 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 PTBP3O95758 552 aaKnown RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 JUNBP17275 347 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 PRKACBP22694 351 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 AZGP1P25311 298 aaKnown RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 MAPK3P27361 379 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 TGFBR2P37173 567 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 PMELP40967 661 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 GATA4P43694 442 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 PDLIM4P50479 330 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 FUT6P51993 359 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 FABP5Q01469 135 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 ZNF154Q13106 437 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 HFEQ30201 348 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 Q5PR19 223 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 TMEM91Q6ZNR0 172 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 RPL3LQ92901 407 aaKnown RBP11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 ERGIC1Q969X5 290 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR51I2Q9H344 312 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 DLL4Q9NR61 685 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 C1orf123Q9NWV4 160 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 CKLFQ9UBR5 152 aa11.9□□□□□ -0.5
APOBEC3B-202ENST00000335760 CSMD1Q96PZ7 3565 aa11.9□□□□□ -0.51
APOBEC3B-202ENST00000335760 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 RP2O75695 350 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 SC5DO75845 299 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 CSF3P09919 207 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 RAB3AP20336 220 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 RBMXP38159 391 aaKnown RBP11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 PPP3R1P63098 170 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 CLEC12BQ2HXU8 276 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 ZNF826PQ6ZT77 177 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 DNAAF1Q8NEP3 725 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 OR11L1Q8NGX0 322 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 CHODLQ9H9P2 273 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 NEK6Q9HC98 313 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 DYSFO75923 2080 aa11.89□□□□□ -0.51
APOBEC3B-202ENST00000335760 TANC2Q9HCD6 1990 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 NAV2Q8IVL1 2488 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 TRAV8-7A0A075B6U6 113 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 hCG_1807616A0A1W2PRN6 198 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 IFNL4K9M1U5 179 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 GABRPO00591 440 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 CDIPTO14735 213 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 MAGEB3O15480 346 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 ALX3O95076 343 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 CYB5R3P00387 301 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 HCKP08631 526 aa11.88□□□□□ -0.51
APOBEC3B-202ENST00000335760 IRF2P14316 349 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms